Gene Vapar_4925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4925 
Symbol 
ID7974207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5233903 
End bp5234331 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content65% 
IMG OID644795520 
Producthypothetical protein 
Protein accessionYP_002946795 
Protein GI239817885 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.15814e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTGGG TTAAATCTCT TCACATCGTC TTCATTGCCA GCTGGTTCGC GGGGTTGTTC 
TACCTCCCCC GGATCTTCGT CAACCTGGCG ATGGTGCCGC CCGAGTCCGT GGCCGAACGC
GAGCGCTTGC TTCTGATGGC GCGCAAGCTG TTGCGCTTCA CCACCTTCCT GGCCATTCCG
GCGCTGGGTT TCGGCCTCTG GCTCTGGCTG GGCTACGGCA TCGGGCGCGG CCCCGGCAAT
GGCTGGCTGC ATGCCAAGCT GGCGCTGGTG CTGGCAGTGA TCGGGTATCA CCATGCCTGC
GGCGTGCTGC TGCGCCGCTT CGTGGCCGGG GGCACCCAGC GCAACGACCG CTGGTACCGC
TGGTTCAACG AACTGCCGGT CCTGCTGCTG CTCGGCATCG TGGTGCTGGT GGTCGTCAAG
CCGTTCTGA
 
Protein sequence
MLWVKSLHIV FIASWFAGLF YLPRIFVNLA MVPPESVAER ERLLLMARKL LRFTTFLAIP 
ALGFGLWLWL GYGIGRGPGN GWLHAKLALV LAVIGYHHAC GVLLRRFVAG GTQRNDRWYR
WFNELPVLLL LGIVVLVVVK PF