| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4917 |
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| Symbol | |
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| ID | 7971611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5225679 |
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| End bp | 5226872 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795512 |
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| Product | elongation factor Tu |
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| Protein accession | YP_002946787 |
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| Protein GI | 239817877 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0050] GTPases - translation elongation factors |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.299024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG GTAAATTCAC CCGCACCAAG CCGCACGTGA ACGTGGGCAC GATCGGTCAC
GTTGACCACG GCAAGACCAC GCTGACGGCG GCCATCGCCA CGGTGCTGTC GGCCAAGTTC
GGCGGCGAAG CCAAGGCCTA CGACCAGATC GACGCGGCGC CCGAAGAAAA GGCCCGCGGC
ATCACCATCA ACACCGCCCA CGTCGAGTAC GAGACGGCCA ACCGCCACTA CGCCCACGTC
GACTGCCCCG GCCACGCCGA CTACGTCAAG AACATGATCA CCGGCGCGGC CCAGATGGAC
GGCGCCATCC TCGTGTGCTC GGCCGCCGAC GGCCCCATGC CCCAGACCCG CGAGCACATC
CTGCTGGCGC GCCAGGTGGG TGTGGGCTAC ATCATCGTGT TCCTGAACAA GTGCGACATG
GTGGACGACG CCGAACTGCT CGAGCTCGTC GAAATGGAAG TGCGCGAACT GCTGGACAAG
TACGAATTCC CGGGCGACGA CACCCCCATC ATCCACGGCT CGGCCAAGCT CGCCCTGGAA
GGCGACAAGG GCAAGCTCGG CGAAGAAGCC ATCATGAAGC TGGCCGAAGC GCTGGACACC
TACATCCCGA CGCCCGAGCG CGCCGTGGAC GGCACCTTCC TGATGCCCGT GGAAGACGTG
TTCTCGATCT CCGGCCGCGG CACCGTGGTG ACCGGCGCCG TCGAGCGCGG CGTGATCAAG
GTCGGCGAGG AAATCGAGAT CGTGGGCATC CGCCCGACCG TCAAGACCAC CTGCACCGGC
GTGGAAATGT TCCGCAAGCT GCTGGACCAG GGCCAGGCGG GCGACAACGT CGGCGTGCTG
CTGCGCGGCA CCAAGCGCGA AGAAGTCGAG CGCGGCCAGG TGCTGTGCAA GCCCGGCTCG
ATCAAGCCGC ACACGCACTT CACCGCCGAG GTGTACGTGC TGTCCAAGGA CGAAGGTGGC
CGTCACACGC CGTTCTTCAA CAACTACCGT CCGCAGTTCT ACTTCCGCAC GACGGACGTG
ACCGGCGCGA TCGAGCTGCC CAAGGACAAG GAAATGGTCA TGCCTGGCGA CAACGTCAGC
ATCACCGTGA AGCTGATCAA CCCGATCGCG ATGGAAGAGG GCCTGCGCTT CGCCATCCGC
GAAGGCGGCC GCACCGTGGG TTCGGGCGTC GTGGCAAAGA TCCTCGACAT CTAA
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| Protein sequence | MAKGKFTRTK PHVNVGTIGH VDHGKTTLTA AIATVLSAKF GGEAKAYDQI DAAPEEKARG
ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVGY IIVFLNKCDM VDDAELLELV EMEVRELLDK YEFPGDDTPI IHGSAKLALE
GDKGKLGEEA IMKLAEALDT YIPTPERAVD GTFLMPVEDV FSISGRGTVV TGAVERGVIK
VGEEIEIVGI RPTVKTTCTG VEMFRKLLDQ GQAGDNVGVL LRGTKREEVE RGQVLCKPGS
IKPHTHFTAE VYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGAIELPKDK EMVMPGDNVS
ITVKLINPIA MEEGLRFAIR EGGRTVGSGV VAKILDI
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