Gene Vapar_4875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4875 
Symbol 
ID7971569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5194039 
End bp5194302 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content58% 
IMG OID644795470 
ProductATP synthase F0, C subunit 
Protein accessionYP_002946745 
Protein GI239817835 
COG category[C] Energy production and conversion 
COG ID[COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 
TIGRFAM ID[TIGR01260] ATP synthase, F0 subunit c 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTTA TTAGCTTTGT TGCACTGGCC GCCGGCCTGA TCATCGGTCT GGGCGCTGTG 
GGCGCATGTA TCGGCATCGG CATCATGGGC AGCAAGTACC TCGAGTCGGC CGCACGTCAG
CCTGAACTCA TGGGTGAACT TCAAACCAAG ATGTTCCTGC TGGCCGGTCT GATCGACGCC
GCTTTCATTA TCGGCACCGG TATCGCCCTG TGGTTCGCAA CGGCCAACCC GTTCCTGGCT
CAGATCGCCA ACCTGCCGAA GTAA
 
Protein sequence
MEVISFVALA AGLIIGLGAV GACIGIGIMG SKYLESAARQ PELMGELQTK MFLLAGLIDA 
AFIIGTGIAL WFATANPFLA QIANLPK