| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4857 |
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| Symbol | |
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| ID | 7971551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5174129 |
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| End bp | 5174578 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795452 |
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| Product | thioredoxin |
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| Protein accession | YP_002946727 |
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| Protein GI | 239817817 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | [TIGR01068] thioredoxin
[TIGR02098] MJ0042 family finger-like domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0651815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGACA CGCCTTCGCT GCACATCGTC TGCCCGCATT GCCACACGAC CAACCGCGTG
CGCGCGGCGC AGCTGGGCAG CGCGCCCGAC TGCGGCAACT GCCACCGCGC ACTGTTCACC
GGCCATTCCA CCGCGCTGCC GGACGAAAAG ACCTTCGACC GCCACATCGC ACGCAATGAA
ATCCCGGTGC TGGTGGACTT CTGGGCGCCC TGGTGCGGCC CCTGCCGCCA GATGGCGCCG
GGCTACGAAC AGGCCGCGGC GCAGCTCGAA CCGCAGGTGC GGCTCGCCAA GGTCGACACG
GAAGCCGTGC CGGCACTGGG CGCGCGCTTC AATATCCGCA GCATCCCGAC GCTGGCGCTG
TTCCGCGGCG GCCGCGAAGT GGCACGCCAG GCCGGCGCCA TGGGCGCGGC GGACATCGTG
CGCTGGGTCA AGGCGCACGG CGCGGGCTGA
|
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| Protein sequence | MTDTPSLHIV CPHCHTTNRV RAAQLGSAPD CGNCHRALFT GHSTALPDEK TFDRHIARNE
IPVLVDFWAP WCGPCRQMAP GYEQAAAQLE PQVRLAKVDT EAVPALGARF NIRSIPTLAL
FRGGREVARQ AGAMGAADIV RWVKAHGAG
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