Gene Vapar_4856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4856 
Symbol 
ID7971550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp5173369 
End bp5174052 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content71% 
IMG OID644795451 
Productmetallophosphoesterase 
Protein accessionYP_002946726 
Protein GI239817816 
COG category[R] General function prediction only 
COG ID[COG1407] Predicted ICC-like phosphoesterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.144245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCTT CGAATCTCCC AGCATCGGCG CTCCCGGTCC AGTGGGCCGG CGAACTGTTG 
CACCTGTTGC CCGAGCACGC CATCTGGTGG CCCGATGGCC GCGTGCTGTT CATTGCCGAC 
CTGCACATCG GCAAGGCCGC GACCTACCGC GCGCTCGGCC AGCCGGTGCC GGGCGGCACC 
ACGCAGGAGA ACCTGGCGCG GCTCGACGCG CTCATTGCGG CCCATGCGCC GCAGCGCATC 
GTGTTCCTTG GCGATTTCCT GCATGCGGCG CAGGCGCGCA CGCCGCAGGT GCTGGCAGCG 
CTGGCCGCCT GGCGCGCCGT GCATGCGTCC ATCGGCATGA CGCTGGTGCG GGGCAACCAC 
GACAGCCGCG CGGGCGATCC GCCCGCCGAG CTCGGCATCG AGGTGGTCGA CGAGCCTTAT 
CTGCTCGGCC CTTTTGCCTG CTGCCACCAT CCGCAGGCGC ATGCCACGCA CTTCGTGCTC 
GCGGGGCACC TGCATCCCGT CTGCCGGCTC TACGGGCCGG GGCGCGACAG CGTGCGGCTG 
CCGTGCTTCG CGAGCGATGC GCAGCAGGCC GTGCTGCCGG CTTTCGGCGA GTTCACGGGC 
GGCTGGTTGA TGGAGCGCGC GCCGGGGCGG CGCTTCTATG CGGTGGGCGG AAAAAGCGTG 
TGGGCGCTGC CGCCATCGGA GTAA
 
Protein sequence
MTASNLPASA LPVQWAGELL HLLPEHAIWW PDGRVLFIAD LHIGKAATYR ALGQPVPGGT 
TQENLARLDA LIAAHAPQRI VFLGDFLHAA QARTPQVLAA LAAWRAVHAS IGMTLVRGNH 
DSRAGDPPAE LGIEVVDEPY LLGPFACCHH PQAHATHFVL AGHLHPVCRL YGPGRDSVRL 
PCFASDAQQA VLPAFGEFTG GWLMERAPGR RFYAVGGKSV WALPPSE