Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4826 |
Symbol | |
ID | 7970296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5144068 |
End bp | 5144700 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644795421 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_002946697 |
Protein GI | 239817787 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.294925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAC TGCTCTACAT CGAGACCTCG CCCAGGAAGA CGCGCTCCGC CAGCATCGAG GTGGCCGGCG CCTTCATCAA TGAAGTGACG CGCATCCACC CGGCCTGCCA TGTCACCACG CTGAACCCCT GGACCATGCA GCTGCCGGAG CTGTCGCAGG ACATGCTCGA TGCCAAGTAC GCCGGCATCA ACGGCGTGCC GCTGAGCGAC GCCCAGCAAG TGGCCTGGGA CGAGGTCCGG CGCATTGCCG TGCCTTTCCA CGCCGCGGAC CACATCGTGC TGGCGATGCC GCTGTGGAAC TTTGGCATTC CCTACAAGCT GAAGCACCTG ATCGACGTGG TGTCGCACAA GGACGTGCTG TTCCGCTTCG ACGCCTCGGG CCTGTCGGGC ATGCTGCAGA CCCGGCGCGC GACGGTGGTG TGCGCAAGGG GCCTGGACTA CCCCCTGGGC AAGGACGGCT CCGCGCATGC GCTCGACTTC CAGCTGCCCT ACATCGAGAC CTGGCTGCGC TTCATCGGCG TGCGCGAGGT GCGCTCCGTG GTGGTCGAGA AAACGCTGAT GGGGCCGGAG GTCGATGCCG GCGCCAGGGC CGAGGCCAGG CGCCGCGCGG TGGAGCTTGC CGAGGGGCTC TGA
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Protein sequence | MKELLYIETS PRKTRSASIE VAGAFINEVT RIHPACHVTT LNPWTMQLPE LSQDMLDAKY AGINGVPLSD AQQVAWDEVR RIAVPFHAAD HIVLAMPLWN FGIPYKLKHL IDVVSHKDVL FRFDASGLSG MLQTRRATVV CARGLDYPLG KDGSAHALDF QLPYIETWLR FIGVREVRSV VVEKTLMGPE VDAGARAEAR RRAVELAEGL
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