| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4779 |
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| Symbol | |
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| ID | 7970249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5091470 |
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| End bp | 5092444 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795374 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946650 |
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| Protein GI | 239817740 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGCC GCACCCTTCT CGCCACGCTC GCCTCCGGCG CCGCCGTAAC CGCCGCGCCC
TTTGCCCGCG CCCAGGACTA CCCGGCGCAA CTCATCAAGT GGGTGGTGCC CTATCCGGCT
GGCGGCGGCA CCGACGTGAT CGCACGCGTG CTGGCCGAGG CCATGCGCCA GACGCTGGGC
CAGCAGATCG TGGTCGACAA CCGCCCCGGC GCCTCGACCA ACATCGGCGC CGACCTCGTC
GCCAAGAGCA AGCCCGACGG CTACACCATC CTCTCGGCGG ACAACGCCGT GCTGGCCTTC
AACGAGCACC TGTTCAGCAA GCTGCCGTTC AATCCGGAGA AGGACTTCAC CTACATCGGC
GCGATCGGCA AGTTCCCGCT CGCGCTGGTG GTGCATCCCG ACTTTCCGGC CAAGAACTTC
AAGGAGTTCC TGGCCTACGC GAAGGCCAAT CCGGGCAAGG TCAACTACGC CTCGCCGGGC
AATGGCTCGC CGCACCACCT GGCCATGGAA ATGTTCAAGG CCCGCACCGG CACCTTCATC
ACCCACATTC CCTACCGCGG CGCGGCGCCC GCCATGGCCG ACGTGATGGG CGGCCAGGTG
CCGTGCATGT TCCTCGACCT GGCCTCGGGC CTGCCGATCA TGCAGGGCAA CAAGGTGCGC
GTGCTGGCCA TCGGCTCGGG CGCGCGCAGC AAGACGCTGC CCAGCGTGCC GACGCTGGCC
GAAGTGGGCG TGCCCAACAC CGAGGTGTTC GCGTTCCAGG GCATCCTCGG CCCGGCGGGG
CTGCCGCCCG CGGTGGTCGC CAGGCTCAAC AGCGAGCTGA ACCGCGCGTT CGGCACGCCG
GCCGTGCAGA AGCGCTTCGA CGATTTCGGC ATGGAAGCCA TGCCGGGCAC ACCGGCGCAG
TTCGCGGCGC TGTCGCGCGC CGAGTCGAAA CGCTGGGGCC CGATCATCAA GCAGGCCGGC
ATCAAGCTGG ATTGA
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| Protein sequence | MDRRTLLATL ASGAAVTAAP FARAQDYPAQ LIKWVVPYPA GGGTDVIARV LAEAMRQTLG
QQIVVDNRPG ASTNIGADLV AKSKPDGYTI LSADNAVLAF NEHLFSKLPF NPEKDFTYIG
AIGKFPLALV VHPDFPAKNF KEFLAYAKAN PGKVNYASPG NGSPHHLAME MFKARTGTFI
THIPYRGAAP AMADVMGGQV PCMFLDLASG LPIMQGNKVR VLAIGSGARS KTLPSVPTLA
EVGVPNTEVF AFQGILGPAG LPPAVVARLN SELNRAFGTP AVQKRFDDFG MEAMPGTPAQ
FAALSRAESK RWGPIIKQAG IKLD
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