| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4770 |
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| Symbol | |
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| ID | 7971780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5068429 |
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| End bp | 5069358 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795355 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_002946641 |
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| Protein GI | 239817731 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATC GCGCCGCGGC CGGGCTGCCG GCGAATCTGG TGGTCTTCGA GCGCGGCTGG
CTGTCGTCGA ACAACATCCT GTTCACCGGG GCCGGCGAGA CCACGCTGGT CGACACCGGG
TACTGCACGC ATGCCGATCA GACACTGGCA CTGGTCGAAT CGGCACTGGG CGGCCGGCCA
CTCGACCGCA TCGTGAATAC GCATCTGCAC AGCGACCATT GCGGCGGCAA CGCGGCGCTG
CAGCAGCGCT ACCCGGCGGT CCGGACAGAC ATTCCGCCCG GCGAGGCGGC GTTGGTGGAG
CGGTGGGATG AGCGCGGGCT GAGTTTTCTT GCGACGGGAC AGACCTGCCC GCGGTTCCGG
TTCACCGGCC TCTTGCGGCC CGGGACCGAA TGCATGCTCG GCGGCATCCC GTGGCAGGTG
CATGGCGCGC CTGGCCATGA TCCCCACTCG ATCATCCTCT TCGATCCCGC TTCACGGACG
CTGATCTCGG CGGACGCCCT GTGGGAAAGC GGCTTCGGCG TCGCCTTTCC CGAACTCGTG
GGCGAACCGT CATTCGGCGA TCTGGCTGTG ACGCTGGATC GGATCGAGGC GCTGGGGCCG
CTGCAGGTGA TCCCGGGCCA TGGTTCGGTC TTTGGCGATG TCGGCAAAGC CTTGGCCACG
GCGCGCCGCC GGCTCGAGGG TCTTCAGCGC GACCCCGTGA AGCATGCGCG GCACGCCATC
AAGGTGCTGA TGAAGTTCAA GCTGCTGGAG GTGCAGTCCA TTGCCCTTGA CGACTGGAAA
GCCTGGGTCC GCAGCACGTC GTATGTGGAT ATCGTTCGTT CGCGCTTCTT TGCCGACGTG
GAATTGGAGC AACTGGCCGG GGACGTCTTG CACGAACTGA TCGGCGCAGG TGCGGCGGAG
ATGGACTCCT CGGGCATCCG CAATATCTGA
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| Protein sequence | MNDRAAAGLP ANLVVFERGW LSSNNILFTG AGETTLVDTG YCTHADQTLA LVESALGGRP
LDRIVNTHLH SDHCGGNAAL QQRYPAVRTD IPPGEAALVE RWDERGLSFL ATGQTCPRFR
FTGLLRPGTE CMLGGIPWQV HGAPGHDPHS IILFDPASRT LISADALWES GFGVAFPELV
GEPSFGDLAV TLDRIEALGP LQVIPGHGSV FGDVGKALAT ARRRLEGLQR DPVKHARHAI
KVLMKFKLLE VQSIALDDWK AWVRSTSYVD IVRSRFFADV ELEQLAGDVL HELIGAGAAE
MDSSGIRNI
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