| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4753 |
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| Symbol | |
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| ID | 7971763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5051184 |
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| End bp | 5052407 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644795338 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002946624 |
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| Protein GI | 239817714 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.84562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCCA TTCAAAATAT GCATGCATCG GCTGGCGCCG CGCCGGAGGG GCGCAGCCTG
CCGGGATCGC TGGTGCTGCT GCTGGCCACG GGTGCGGGCC TGTCGGTGGC GTCGCTCTAC
TACGCCCAGC CGATGCTCGG CGTGCTGGGC GCGGACATCG GCGCCTCGCC CCGCTCGGTG
GGGCTCATTC CCACGCTCAC GCAGCTGGGC TACGCACTCG GCATCCTGCT GCTGGCGCCG
CTGGGCGACC GCTTCGACCG GCGCCGCATC GTGCTGGCCA AGGCGGCCGC GCTGTGCGCC
GCGCTGCTGG TGGCCGGCGC CGCGCCGTCG ATCGGCGTGC TGCTCGCGGC CAGCCTGGCG
ATCGGCCTGG CGGCCACCAT GGCGCAGGAC ATCGTGCCCG CGGCCGCCAC GCTGGCACCC
GAGGCCTCGC GCGGCAAGAC GGTGGGCACG GTGATGACCG GGCTGCTGCT GGGCATCCTG
CTGTCGCGCG TGGTGAGCGG TTTCGTGGCC GAGCACTTCG GCTGGCGCGC GATGTTCATC
GCGGCCGCGG CCAGCATCGC GCTGATCGGC GCGGCCGCCT GGCGCGGGCT GCCGCGCTTC
CGGCCCACCA CGCACCTGGC CTACGCCGCG CTGCTCGGCT CCCTGGGCAC GCTGTGGTCG
CGCCACGGCA TGCTGCGCCG CGCCGCGCTG GCCCAGGCGC TGCTGGCGGT GGGATTCAGC
GCGTTCTGGT CGACGCTGGC CGTGATGCTG CATGGCGCCC CCTTCCACCT GGGCAGCGCG
GCGGCGGGCG CCTTCGGCCT GGCCGGCGCG GCCGGCGCGC TGGCGGCGCC GCTGGCCGGC
CGGCTGGCCG ACCGCCGCGG GCCCGAGCTG GTGACGCGGC TGGGCGCCGG GCTGGCGGTG
CTGTCGTTCG CGGCCATGGG CCTGGCACCG CTGATGGCGC CGCAGGCGCA GCTCTGGCTG
CTGGCGCTGG CCGCGGTCGG CTTCGACCTG GGCATGCAGG CGGCGCTGAT CGCGCACCAG
ACCATCGTCT ACGGCATCGA GCCCGGTGCG CGCAGCCGGC TCAACGCGGT GCTGTTCACC
AGCATGTTCA TCGGCATGGC GGCCGGCTCG GCGCTGGGTG CGCTGGCGCT CGCGCAGTGG
GGCTGGGCCG GCGTGACCGG GCTGGCGACC GCCACGGCCG CCGCGGCGCT GGCGGTGCGG
CTCTGGCCGC GCAAGGCCAG GTAG
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| Protein sequence | MSSIQNMHAS AGAAPEGRSL PGSLVLLLAT GAGLSVASLY YAQPMLGVLG ADIGASPRSV
GLIPTLTQLG YALGILLLAP LGDRFDRRRI VLAKAAALCA ALLVAGAAPS IGVLLAASLA
IGLAATMAQD IVPAAATLAP EASRGKTVGT VMTGLLLGIL LSRVVSGFVA EHFGWRAMFI
AAAASIALIG AAAWRGLPRF RPTTHLAYAA LLGSLGTLWS RHGMLRRAAL AQALLAVGFS
AFWSTLAVML HGAPFHLGSA AAGAFGLAGA AGALAAPLAG RLADRRGPEL VTRLGAGLAV
LSFAAMGLAP LMAPQAQLWL LALAAVGFDL GMQAALIAHQ TIVYGIEPGA RSRLNAVLFT
SMFIGMAAGS ALGALALAQW GWAGVTGLAT ATAAAALAVR LWPRKAR
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