Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4744 |
Symbol | glyQ |
ID | 7971754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5042604 |
End bp | 5043509 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644795329 |
Product | glycyl-tRNA synthetase subunit alpha |
Protein accession | YP_002946615 |
Protein GI | 239817705 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGACCT TCCAGCAAAT CATTCTCAAA CTGCAGTCGT ACTGGGCCGA CAAGGGCTGT GCGCTGCTGC AACCCTACGA CATGGAAGTG GGCGCGGGCA CCTCGCACAC CGCCACCTTC CTGCGCGCAC TCGGCCCCGA GCCCTGGAAG GCCGCCTACG TGCAGCCCAG CCGCCGCCCC AAGGACGGCC GCTACGGCGA GAACCCCAAC CGCCTGCAGC ACTACTACCA GTACCAGGTG GTGCTCAAGC CGGCGCCCAG CAACATCCTG GAGCTGTACC TCGGCAGCCT CGAGGCGCTG GGCTTCGACT TGAAGAAAAA CGACATCCGC TTCGTCGAAG ACGACTGGGA GAATCCCACG CTCGGCGCCT GGGGCCTGGG CTGGGAAGTC TGGCTCAACG GCATGGAAGT GACGCAGTTC ACCTATTTCC AGCAGGTCGG CGGCATCGAC TGCAAGCCCA TCACCGGCGA GATCACCTAC GGCCTGGAGC GGCTGGCCAT GTACCTGCAG GGCGTGGACA ACGTCTACAA CCTCACCTGG ACCGACGGCC TGAGCTACGG CGACGTCTAC AAGCAGAACG AGGTCGAGCA GTCGACCTAC AACTTCGAGC ACAGCGACGC CGAGTTTTTG TTCACTGCCT TCGCGGCGCA CGAGAAGCAG GCCAGGCACC TCATGACAGA GCAGCTCGCG CTGCCGGCCT ACGAGCAGGT GCTCAAGGCC GCGCACAGCT TCAACCTGCT CGACGCGCGC GGCGCCATCA GCGTGACCGA GCGCGCGGCC TACATCGGCC GCATCCGCAA CCTCGCGCGC AGCGTGGCGC AGAGCTACTA CGAGAGCCGC CAGCGGCTCG GTTTTCCGAT GGCGCCTCGC GAGTGGGTTG CACAAATCAC GAAGAAGGCG GCCTGA
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Protein sequence | MLTFQQIILK LQSYWADKGC ALLQPYDMEV GAGTSHTATF LRALGPEPWK AAYVQPSRRP KDGRYGENPN RLQHYYQYQV VLKPAPSNIL ELYLGSLEAL GFDLKKNDIR FVEDDWENPT LGAWGLGWEV WLNGMEVTQF TYFQQVGGID CKPITGEITY GLERLAMYLQ GVDNVYNLTW TDGLSYGDVY KQNEVEQSTY NFEHSDAEFL FTAFAAHEKQ ARHLMTEQLA LPAYEQVLKA AHSFNLLDAR GAISVTERAA YIGRIRNLAR SVAQSYYESR QRLGFPMAPR EWVAQITKKA A
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