| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4722 |
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| Symbol | |
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| ID | 7971732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5016520 |
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| End bp | 5018148 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795307 |
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| Product | Methylcrotonoyl-CoA carboxylase |
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| Protein accession | YP_002946593 |
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| Protein GI | 239817683 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.701112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA TCGAAACGAA ATTGAATGCC CGTTCGGCCG ACTTCCAGGC CAATGCCGCA
GCCATGCGCG CGCTGGTCGA CGACCTGCAC AAGCAGTTCG CGAAAGTGGA GCAGGGCGGC
GGCGAGGCCG CGCGCGCCAA GCACACGGCG CGCGGCAAGC TGCTGCCGCG CGACCGCGTG
GCCGAGCTGC TCGACCCCGG CACGCCCTTC CTCGAGATTG CGCCGCTGGC CGCGCATGCG
ATGTACCTCG ATGCCAAGGG CGCGGAGTCG GCACCCGGCG CGGGCCTCAT CGCGGGCATC
GGCCGGGTGA ACGGCATCGA CTGCATGATC GTCTGCAACG ACGCGACGGT GAAGGGCGGC
ACCTATTACC CGATGACGGT CAAGAAGCAC CTGCGCGCGC AGGAGATCGC CGAGCAGAAC
CGCCTGCCCT GCATCTACCT CGTCGACTCG GGCGGCGCCA ACCTGCCGAA CCAGGACGAG
GTGTTCCCCG ACCGCGACCA CTTCGGCCGC ATCTTCTACA ACCAGGCCAA CATGAGCGCC
CAGGGCATCG CGCAGATCGC GGTGGTCATG GGCTCGTGCA CGGCAGGCGG CGCGTATGTG
CCGGCGATGA GCGACGAGTC GATCATCGTG AAGAACCAGG GCACCATCTT TTTGGGCGGC
CCGCCGCTCG TGAAGGCTGC GACGGGCGAG GTCGTCACGG CCGAGGACCT GGGCGGCGGC
GACGTGCACA CGCGCTTGTC GGGCGTGGTC GACCACCTGG CGCAGAACGA CCTGCATGCG
CTGGCGCTCG CGCGCTCGGC CGTGGCCAAT CTCAATGCGA AGGCGGCCTC GGCCCAGGAC
ACTGCAAGGA CCGAGGTGCG CCCACCCGAG TTCCCGCGCG AAGAGCTCTA CGGCGTGATC
CCGACCGACA CGCGCAAGCC CTTCGATGTG CGCGAGATCA TCGCGCGCAT CGTCGACGGC
AGCGAGTTCC ACGAGTTCAA GGCGCGCTTC GGCGCCACGC TGGTCTGCGG CTTTGCCGAG
ATCGAGGGCA TGCCGGTGGG CATCATCGCC AACAACGGCA TCCTGTTTTC CGAATCGGCG
CAGAAGGGCG CGCACTTCAT CGAGCTGTGC TGCCATCGCA AGACGCCGCT GGTGTTCCTG
CAGAACATCA CGGGCTTCAT GGTGGGCCGC AAGTACGAGA ACGAGGGCAT CGCGCGCCAC
GGCGCCAAGA TGGTGACGGC CGTGGCCACG GCCAACGTGC CCAAGTTCAC CATCATCATC
GGCGGCAGCT TCGGCGCCGG CAACTACGGG ATGTGCGGCC GGGCCTACAG CCCGCGCTTC
CTCTGGATGT GGCCCAACGC GCGCATCAGC GTGATGGGCG GCGAGCAGGC CGCGAGCGTG
CTGGCCACGG TGAAGCGCGA CGGCATCGAA TTGAAGGGCG GCAGCTGGAG CAAGGAAGAG
GAAGAAGCCT TCAAGGCGCC GATCCGCCAG CAGTACGAAG ACCAGGGCCA CCCCTACTAC
GCAACGGCGC GGCTGTGGGA CGACGGGATC ATCGACCCGG CGGACACGCG GCGGGTGCTG
GCGCTCGGTT TGGCTGCGTC GCGCAATGCG CCGATTCCCG AGCCGAAGTT CGGCATCTTC
CGGATGTAG
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| Protein sequence | MSKIETKLNA RSADFQANAA AMRALVDDLH KQFAKVEQGG GEAARAKHTA RGKLLPRDRV
AELLDPGTPF LEIAPLAAHA MYLDAKGAES APGAGLIAGI GRVNGIDCMI VCNDATVKGG
TYYPMTVKKH LRAQEIAEQN RLPCIYLVDS GGANLPNQDE VFPDRDHFGR IFYNQANMSA
QGIAQIAVVM GSCTAGGAYV PAMSDESIIV KNQGTIFLGG PPLVKAATGE VVTAEDLGGG
DVHTRLSGVV DHLAQNDLHA LALARSAVAN LNAKAASAQD TARTEVRPPE FPREELYGVI
PTDTRKPFDV REIIARIVDG SEFHEFKARF GATLVCGFAE IEGMPVGIIA NNGILFSESA
QKGAHFIELC CHRKTPLVFL QNITGFMVGR KYENEGIARH GAKMVTAVAT ANVPKFTIII
GGSFGAGNYG MCGRAYSPRF LWMWPNARIS VMGGEQAASV LATVKRDGIE LKGGSWSKEE
EEAFKAPIRQ QYEDQGHPYY ATARLWDDGI IDPADTRRVL ALGLAASRNA PIPEPKFGIF
RM
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