Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4710 |
Symbol | |
ID | 7971720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5005208 |
End bp | 5006128 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644795295 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_002946581 |
Protein GI | 239817671 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCC CCGCCAAGGT CCAGATCATC GACGTCGGTC CGCGCGACGG ACTGCAGAAC GAGAAGCAAC CGGTCTCCGC CGAAATCAAG ATCGGCCTCG TGCACCGCCT GCAGGACGCC GGCCTGAAGG AGATCGAGGT CACCAGCTTC GTGAGCCCCA AGTGGGTGCC GCAGATGGCC GACAACGCCG AGGTGATGCA CGGCATCCGG CGCAAGCCCG GCGTGCGCTA TTCGGTGCTC ACGCCCAACA TGAAGGGCTT CGAGGCCGCC ATTGCTGCCC CGCGCGAGGA GTGGCCTGAC GAGATCGTGA TGTTCGGCGC CGCGAGCGAG GCCTTCAGCC AGAAGAACAT CAACTGCTCC ATTGCCGAAA GCATCGAGCG CTTCGCGCCC GTGGTGGCCG CGGCGCGCGA GAAGGGCATC GATGTGCGCG GCGCCATGTC GTGCACCGTG GGCTGCCCGT ATGAAGGCGA GGTCGCACCC GAGCGCGTGG GCATGCTGGC AAAGCTGATG AAGGACATCG GCGTGCAGCG CGTGGACGTG GCCGACACCA TCGGCGTGGG CACGCCGCGC AAGGTGAAGG CCGCCATCGA GGCCACGCTG GCGCACTTCG GCGTGGACCA CATCTCGGGC CACTTCCACG ACACCTACGG CCAGGCGCTG GTCAACACGC TGGCCTCGCT GGAGCTGGGG GTCTGGAACT TCCAGTCGTC CTCCGCGGGC CTCGGCGGCT GTCCCTATGC CAAGGGCGCG ACCGGCAACG TGGCCACCGA AGACGTGGTC TACATGCTGC ACGGCATGGG CATCGAAACC GGCATCGACC TGGACAAGCT GATCGACGCC GGCGTGTACA TCAGCGAGGC GCTGGGGCGC GAGCCGAACT CGCGCGCCTC GAAGGCCCTG CGCATCAAAC GGGCGGGTTG A
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Protein sequence | MKLPAKVQII DVGPRDGLQN EKQPVSAEIK IGLVHRLQDA GLKEIEVTSF VSPKWVPQMA DNAEVMHGIR RKPGVRYSVL TPNMKGFEAA IAAPREEWPD EIVMFGAASE AFSQKNINCS IAESIERFAP VVAAAREKGI DVRGAMSCTV GCPYEGEVAP ERVGMLAKLM KDIGVQRVDV ADTIGVGTPR KVKAAIEATL AHFGVDHISG HFHDTYGQAL VNTLASLELG VWNFQSSSAG LGGCPYAKGA TGNVATEDVV YMLHGMGIET GIDLDKLIDA GVYISEALGR EPNSRASKAL RIKRAG
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