| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4657 |
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| Symbol | ruvB |
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| ID | 7972868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4948566 |
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| End bp | 4949630 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795242 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_002946528 |
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| Protein GI | 239817618 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCC AGACCGACGA TTTCGCCCCA GCCCCGCCCC GCGTGGTGTC CGCCGCCCCC
GCTTCGCCCC AGGAAGAGGC CATCGAGCGG GCGCTGCGCC CCAAGCTGCT GGACGAATAC
GTCGGCCAGG CCAAGGTGCG CGAGCAGCTC GAGATCTTCA TCGGCGCGGC GCGCAAGCGC
AAGGAAGCGC TCGACCACGT GCTGCTGTTC GGCCCGCCGG GCCTGGGCAA GACCACGCTG
TCGCACATCA TCGCGGCCGA GCTGGGCGTG AACCTGCGCC AGACCTCCGG GCCGGTGCTC
GAGAAGCCCA AGGACCTGGC GGCGCTCCTG ACCAACCTGG AGCCCAACGA TGTGCTCTTC
ATCGACGAGA TCCATCGCCT GAGCCCGGTG GTCGAGGAAA TCCTCTACCC CGCGCTCGAG
GACTACCAGA TCGACATCAT GATCGGCGAA GGCCCCGCGG CGCGCAGCAT CAAACTCGAC
CTGCAGCCCT TCACGCTGGT GGGCGCCACC ACCCGCGCCG GCATGCTCAC CAATCCGCTG
CGCGACCGCT TCGGCATCGT GGCGCGGCTG GAGTTCTACA CGCCCGAGGA ACTGGCGCTC
ATCGTGCGGC GCAGCGCCGG CCTGCTCAAG GTGGACACCG ACGCGGCCGG CGGCTTCGAG
ATCGCGCGCC GTTCGCGCGG CACGCCGCGC ATCGCCAACC GCTTGCTGCG GCGCGTGCGC
GACTATGCCG AGGTGAAGGG CAACGGCCGC ATCACCGAAG ACATCGCGCA CAAGGCGCTT
GTCATGCTCG ACGTCGACCC GCAGGGCTTC GACCTGATGG ACCGCAAGCT GCTCGAAGCC
GTGATCCACC GCTTCGACGG CGGCCCGGTG GGGCTGGACA ACGTGGCGGC CAGCATCGGC
GAGGAACGGG ACACCATCGA GGACGTGATC GAGCCCTACC TCATCCAGCA GGGCTACCTG
CAGCGCACCC CGCGCGGGCG CATCGCCACG CTGGCGGCCT ACCGCCACCT GGGCGTGACG
CCGCCTTCGA GCCGCTCCGA CGGACAAGAC CTCTTCGGAA TCTGA
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| Protein sequence | MTIQTDDFAP APPRVVSAAP ASPQEEAIER ALRPKLLDEY VGQAKVREQL EIFIGAARKR
KEALDHVLLF GPPGLGKTTL SHIIAAELGV NLRQTSGPVL EKPKDLAALL TNLEPNDVLF
IDEIHRLSPV VEEILYPALE DYQIDIMIGE GPAARSIKLD LQPFTLVGAT TRAGMLTNPL
RDRFGIVARL EFYTPEELAL IVRRSAGLLK VDTDAAGGFE IARRSRGTPR IANRLLRRVR
DYAEVKGNGR ITEDIAHKAL VMLDVDPQGF DLMDRKLLEA VIHRFDGGPV GLDNVAASIG
EERDTIEDVI EPYLIQQGYL QRTPRGRIAT LAAYRHLGVT PPSSRSDGQD LFGI
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