| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4640 |
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| Symbol | |
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| ID | 7972850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4930854 |
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| End bp | 4931771 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644795224 |
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| Product | ribokinase |
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| Protein accession | YP_002946511 |
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| Protein GI | 239817601 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.162899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGCTCG GCAGCCTGAA CATGGACATC GTGCTGCGCG TGCCGCATGC GCCGGCCGCG
GGCGAAACCC TGCTGGGCCA TTCGATCGCC CACATTCCGG GCGGCAAGGG CGCCAACCAG
GCCGTGAGCT GCGCGCGCGA AGGCGGCCGC GTCGGCATGA TCGGCTGCGT CGGCAACGAC
GCGCACGGCC AGGCGCTGCG CGATGCGCTC GGGCGCGACG GCATCGACAC CACCGCGCTG
CGCACCAGCC CGAGCGAGCC CACGGGCACC GCGCTGATCC TGGTGGAAGA CGGCGGCCAG
AACCGCATCG TGATGATTCC CGGCGCCAAC GCGCAGGCCG AGATCGACGC GCCGGCGCTG
CGCCAGCAGC TGCAGGGCGC GGCCTTCCTG GTGACGCAGT TCGAGATACC GCTGGACCAG
GTCGCGCGCG CCATTTCGGT GGCGCACGAG GCCGGCTGCA AGGTGCTGCT CAACCCGTCG
CCGGTGCAGC CGATCGCCGA GCCGCTGTGG CCGCGCATCG ACACGCTGGT CGTCAACGAG
ATCGAGGCCC AGGCGCTGTG CGGCCAGGCC GCCGACAGCC CGCAGGAAGC CGCGCTGGCC
GGCCAGGCCC TGCGCGCCAA GGGCATTGCG CGCGTGGTCG TCACGCTCGG CGCGCGCGGC
GCCGTGGCCA TCGATGCCGA TGGCGCGCGC CACCATCCCG CGCCCCAGGT CCAGGCGGTC
GACACCACGG CCGCAGGCGA CACCTTCCTG GGCGCGCTGG CCGTGGCGCT GGGCGAGGGC
CAGTCCTTCG ACGAAGCCGT GCGCCTGGGC ATTCGCGCCG CCGCGCTGTG CATCCAGCAG
CCCGGCGCCC AGCCTTCCAT TCCGCAGCGC GATGCCGTGC TGCAAAGCCC CCTGCCACCC
GACTGGATCG CACTGTGA
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| Protein sequence | MVLGSLNMDI VLRVPHAPAA GETLLGHSIA HIPGGKGANQ AVSCAREGGR VGMIGCVGND
AHGQALRDAL GRDGIDTTAL RTSPSEPTGT ALILVEDGGQ NRIVMIPGAN AQAEIDAPAL
RQQLQGAAFL VTQFEIPLDQ VARAISVAHE AGCKVLLNPS PVQPIAEPLW PRIDTLVVNE
IEAQALCGQA ADSPQEAALA GQALRAKGIA RVVVTLGARG AVAIDADGAR HHPAPQVQAV
DTTAAGDTFL GALAVALGEG QSFDEAVRLG IRAAALCIQQ PGAQPSIPQR DAVLQSPLPP
DWIAL
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