| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4639 |
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| Symbol | |
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| ID | 7972849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4929727 |
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| End bp | 4930800 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795223 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_002946510 |
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| Protein GI | 239817600 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.496087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCA TCAAGGACGT CGCGCTGCGC GCGGGCGTTT CGGTCACCAC CGTCTCGCAC
GTGGTCAACG ACACGCGTCA TGTGAGCGCC AAGGGCCGCG AGCGCGTGGA AGAGGCCATC
CGCGAGCTGG GCTACGTGCC CAACGCGATG GCGCGCAGCC TCAAGAGCAA CACCACCTCG
ACGCTCGGCA TGCTGATTCC GAACAGCTCG AACCCCTACT TTGCCGAGAT CGTGCGCATC
GTCGAGGACC GCTGCTTCGG CGCCGGCTAC ACGCTGGTGC TGTGCAACAC GGACGACGAG
CCGCGCCGCC AGAGCGTCTA CCTGCAGGTG CTGGCCGAGC GCCGCATCGA CGGGCTGATC
GTGGTGTCGA CCGGCGCCGG CGACGACGAT TCGCTCGTCA CGCAGCTGCA CGGCCTGCGC
ATTCCCACGG TGCTGGTCGA CCGCGAGATT GCCGACCCGG CCTGCGACCT GGTCGAAACC
GCCCACATGC AGGGCGGGCT GCTCGCGGTG CGGCACCTGC TGTCGCTCGG CCACAAGCGC
ATTGCCTGCA TCGGCGGGCC GGTAGGCGTG ATGCCGAGCG AGCAGCGCAT CGAGGGCTGG
CGCATGGCGC TTGCCGAGGC CGGCACCGCG CCGAATGCCG ACGCCCTGCT GTGGCGCGGC
GGCTTCACGA GCCAGGGCGG CTACGAGGCA ATGCACGCGA TCCTGCGCAC CGAAGAGGCG
CCCTCGGCCG TCTTCGTCTG CAACGACCTG ATGGCCATCG GCGCCCTGCG CGCCGCGCAT
GAAAGCGGCG TGCGCGTGCC CGACGAGCTC TCGATCGTGG GCTTCGACGA CATCGAACTC
TCGGCCTACA CCAGCCCGCC GCTCACCACC GTGGCGCAGC CCAAGGAGCG CATCGGCGCG
CTCGCGGTCG ACATGCTGCT GGAGCGCGTG GGCGGCAAGC GGCGCGATGC GCGCAAGGTG
GTGCTGCAGC CCGAGCTGCG CGTGCGCGCC TCGACCGCGC GGCACGCGAG CTTCCGCGAG
GCCGCCGCGC CGTCTTCCTC TTCCACGCCA AGCCGAAAGT CCCGCACCCC GTGA
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| Protein sequence | MATIKDVALR AGVSVTTVSH VVNDTRHVSA KGRERVEEAI RELGYVPNAM ARSLKSNTTS
TLGMLIPNSS NPYFAEIVRI VEDRCFGAGY TLVLCNTDDE PRRQSVYLQV LAERRIDGLI
VVSTGAGDDD SLVTQLHGLR IPTVLVDREI ADPACDLVET AHMQGGLLAV RHLLSLGHKR
IACIGGPVGV MPSEQRIEGW RMALAEAGTA PNADALLWRG GFTSQGGYEA MHAILRTEEA
PSAVFVCNDL MAIGALRAAH ESGVRVPDEL SIVGFDDIEL SAYTSPPLTT VAQPKERIGA
LAVDMLLERV GGKRRDARKV VLQPELRVRA STARHASFRE AAAPSSSSTP SRKSRTP
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