| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4469 |
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| Symbol | |
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| ID | 7972757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4714772 |
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| End bp | 4715959 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644795058 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946346 |
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| Protein GI | 239817436 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3825] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.209689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGATCG ATTTCTTCTA CACGCTGCGC TCGGCCAAGC TGCCGGTCTC GGTCAAGGAA
TACCTCACGC TGCTCGAGGC GCTGCAGGCC GACGTGGTGG GCCCCAACTC CGACGGCGCC
TTCGGCCTGG ACGACTTCTA CTATCTCTCG CGCACCGCGC TTGTCAAGGA CGAGAAGCAC
TACGACAAGT TCGACCGCGC CTTTGCCGCC TACTTCAAGG GCGTGGAGAT GCTGGCCGAC
TTCACCAAGG AAGTGCCGCT CGACTGGCTG CGCAAGACAC TGGAGCGCGA GTTCACGGCC
GAGGAAAAGG CCAAGATCGA GAAGATGGGC TGGGACGAGC TCATGGAAAC GCTCAAGAAG
CGCTTCGAGG AACAGAAGGA GCGCCACGAG GGCGGCAACA AGTGGATCGG CACCGGCGGC
ACCTCGCCCT TCGGCCACGG CGGCTACAAC CCGCAGGGCG TGCGCATCGG CGGCGCGGGC
AAGAACAAGA GCGCCGTGAA GGTGTGGGAC CAGCGCGCCT ATAAAGACTA CGACGACAGC
CAGGAACTCG GCACGCGCAA CATCAAGGTG GCGCTGCGGC GGCTGCGCAA GTTCGCGCGC
GAGGGCCACG AGGAAGAGCT GGACCTGGAC GACACCATCC ACTCGACCGC GGCCAATGCC
GGCTACCTCG ACATCAAGAT GCGGCCCGAG CGCCACAACA ACGTCAAGGT GCTGCTGCTG
ATGGACGTGG GCGGCACCAT GGACGAGCAC ATCCAGCGCG TGGAAGAGCT GTTCTCGGCC
GTCAAGACCG AGTTCAAGCA CCTGGAGTTC TTCTACTTCC ACAACTGCGT CTACGACTTC
ATGTGGAAGA ACAACAAGCG CCGCTTCTCC GAGAAGTTCG CGACCTGGGA CATCCTGCGC
AAGTACAACA AGGACTACAA GCTCATCTTC GTCGGCGACG CGACCATGAG CCCCTACGAG
ATCCTGCAGC CCGGCGGCAG CGTCGAATAC AACAACGAGG AAGCCGGCGC CGAATGGATC
CAGCGCCTCA CGCACACCTT CCCCAAGTTC GCCTGGATCA ACCCCGAGCC GCAGGGCGTG
TGGCAGTACC GCCAGAGCAT CGCGGTGATG CAGCAGCTCA TGTCCAACCG CATGTATCCG
CTCACGCTGC GCGGCCTCGA AGAAGCAATG CGAATGCTTT CTAAGTAA
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| Protein sequence | MLIDFFYTLR SAKLPVSVKE YLTLLEALQA DVVGPNSDGA FGLDDFYYLS RTALVKDEKH
YDKFDRAFAA YFKGVEMLAD FTKEVPLDWL RKTLEREFTA EEKAKIEKMG WDELMETLKK
RFEEQKERHE GGNKWIGTGG TSPFGHGGYN PQGVRIGGAG KNKSAVKVWD QRAYKDYDDS
QELGTRNIKV ALRRLRKFAR EGHEEELDLD DTIHSTAANA GYLDIKMRPE RHNNVKVLLL
MDVGGTMDEH IQRVEELFSA VKTEFKHLEF FYFHNCVYDF MWKNNKRRFS EKFATWDILR
KYNKDYKLIF VGDATMSPYE ILQPGGSVEY NNEEAGAEWI QRLTHTFPKF AWINPEPQGV
WQYRQSIAVM QQLMSNRMYP LTLRGLEEAM RMLSK
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