| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4460 |
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| Symbol | |
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| ID | 7972748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4705424 |
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| End bp | 4705930 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795049 |
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| Product | peptidoglycan-associated lipoprotein |
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| Protein accession | YP_002946337 |
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| Protein GI | 239817427 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.298566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACA GCAGCAGCAG CTACCGGATA CTGGCCATCG TCGCCCTCGC AGCAAGCCTT
GCCGCTTGCG GAACCGCCGC CACGAGCGGA CGCGAGGACG CCACCTACTA CTACTCGAAC
AAGGCAGCCC CGGTGGCGAA GGTGGAACCA CCCCCGCCCG CGCCGGTGCA GAACGGCCCC
GCACTGAAGA TCGTGTACTT CGACTTCGAC AAATACGACG TCAAGCCGCA GTACCGCAAC
GTGGTGGAAG CGCATGCGAG CTACCTGCGC AACCGTCCCG CCAGCAAGGT GGTGATCGAG
GGCCACACCG ACTTGCGCGG CGGCCGCGAA TACAACCTTG CGCTGGGCCA GCGCCGGGCC
GAATCCGTGC AGCGCGCGCT CACGCAGCTT GGCGTGCCGG GCGAACGGAT CGAGGCCGTC
AGCTGGGGTA TTGAAAAACC CGCGTCGCTC GAAACCACCG AGGAGGGCCA CCAGCTCAAT
CGCCGAGCCG AATTCAGCTA CCGCTGA
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| Protein sequence | MKNSSSSYRI LAIVALAASL AACGTAATSG REDATYYYSN KAAPVAKVEP PPPAPVQNGP
ALKIVYFDFD KYDVKPQYRN VVEAHASYLR NRPASKVVIE GHTDLRGGRE YNLALGQRRA
ESVQRALTQL GVPGERIEAV SWGIEKPASL ETTEEGHQLN RRAEFSYR
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