Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4426 |
Symbol | |
ID | 7974100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4666936 |
End bp | 4668726 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644795015 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_002946303 |
Protein GI | 239817393 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0785] Cytochrome c biogenesis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCATCC TCTTCATTGC CTACATGGGC GGGGTGCTCA CCATCCTGAG CCCCTGCATC CTGCCGGTGC TGCCTTTCGT GTTCGCCCGC GCCGACCGTC CGTTCCGCTC GCACGGCCTG CCGATGCTGA TGGGCATGGC GCTGGCCTTT GCCGCCGTGG CCACGCTGGC GGCGGTGGGC GGCGGCTGGA TCGTCACGCT CAACGAATAT GGGCGCCATG GCGCCATCGC CCTGCTCGCG CTGTTCGGCC TGACTTTGCT GTTCCCCGGC GTGGCCGAGC GCCTGAGCCG GCCGCTGGTG GCGCTGGGCC TCCGCATGTC CGAGCCGCGC GGCAGCGATG GCGCGGCGCC TGCATCCGGG TTCTCGCCGC TGCTGCTGGG CGTGGGCACC GGCCTGCTCT GGGCGCCGTG CGCGGGGCCG ATCCTCGGCC TGATCCTGAC GGGCGCGGCG CTCAATGGCG CGAGCGTCGG CACCTCGCTG CTGCTGCTGG CCTATGCGGC CGGCGCCTGC ACCTCGCTCG CGGCCGCGCT GCTGTTCGGC GGGCGGCTTC TCTCCGTCAT GAAGCGTTCG CTGCATACCG GCGAATGGGT GCGGCGCGCG GCCGGCGCGG CCGTGCTGGT GGGCGTGGGC GCCATTGCGC TCGGGCTGGA CACCGGCTTG CTCGCCCGCC TGTCGGTGGG CACTACGTCG GCGCTGGAGC AGGCGCTGGT GGACAGGATC AAGCCGGGCA AGCCGCAGGC GGAACCGGTC GCGGCGCGCG AAGACGCGGG CCTCCTGCGC GTGTCGGACA ACCGCACGGC CCCGCCGCCC GCGCGCGAGC TCAGGGTCGA AGGCCGCTTT CCTTCACTGG CCGGCGCCAC CGAATGGATC AACTCTGCGC CGCTCGCGCC CGAGGCCCTG CGCGGCAAGG TGGTGCTGGT CGACTTCTGG ACCTACTCGT GCATCAATTG CCTGCGCACG CTGCCCTACC TTCGTGCATG GGCCGAGAAG TACAAGGACG CGGGGCTGGT GGTCATCGGC GTGCATTCGC CGGAGTTCGC GTTCGAGAAG CAGCCGGCCA ACGTGCGCAA GGCCGTCCAG GACCTGGACA TCGGCTTTCC GGTGGCGCTG GACAACGACT TCGCGATCTG GCGCGGCTTC GACAACCAGG CCTGGCCCGC GTTCTATTTC ATCGATGCCG AGGGCCGCAT CCGCCACCAC CAGTTCGGCG AGAACCGCTA CGACAAGGCC GAGCAGGTCA TCCAGCAGCT GCTGGCCGAG GCGGGCCAGA CCCGCATCGC CGCCGGGCTG GTGGCGCCGC TCGGGCAGGG TACCCAGGCC GCGCCCGGCG CCGAGCCGCC GCTCTCCGGC GAAACCTACC TGGGCCACGA GCGTGCGCAC GGCTTTGCCT CGCCCGGGGG CATCGTGGGG GACCATGCGA AGGCCTACCA GCCCGCGGCC TCGGCGCTGC GCACCAACCA GTGGTCGCTG GCCGGCGACT GGACGGTGGA GGCCGAGCGC GCCGTGCTGA ACAGCGCCAA TGGCCGCATC GCCTACCGCT TCCAGGCGCG CGACCTGCAC CTGGTGCTGG GGCCGGCGGC CAACCGCAAG CCGGTGCGCT TCAGGGTGCT GGTGGATGGA AAGCCGCCGC TCGCGGACCA CGGTTCCGAC ACCGACGTAC AGGGCTACGG CGTGATCGAT GCACAGAAGC TGTACCAATT GGTGCGGCAG GCGGAGGGCA GCCGGGAGCG GCTGTTCGAG ATCGAGTTTC TCGACGCCGG CGCGCAGGCC TACGCGTTCA CTTTCGGTTG A
|
Protein sequence | MLILFIAYMG GVLTILSPCI LPVLPFVFAR ADRPFRSHGL PMLMGMALAF AAVATLAAVG GGWIVTLNEY GRHGAIALLA LFGLTLLFPG VAERLSRPLV ALGLRMSEPR GSDGAAPASG FSPLLLGVGT GLLWAPCAGP ILGLILTGAA LNGASVGTSL LLLAYAAGAC TSLAAALLFG GRLLSVMKRS LHTGEWVRRA AGAAVLVGVG AIALGLDTGL LARLSVGTTS ALEQALVDRI KPGKPQAEPV AAREDAGLLR VSDNRTAPPP ARELRVEGRF PSLAGATEWI NSAPLAPEAL RGKVVLVDFW TYSCINCLRT LPYLRAWAEK YKDAGLVVIG VHSPEFAFEK QPANVRKAVQ DLDIGFPVAL DNDFAIWRGF DNQAWPAFYF IDAEGRIRHH QFGENRYDKA EQVIQQLLAE AGQTRIAAGL VAPLGQGTQA APGAEPPLSG ETYLGHERAH GFASPGGIVG DHAKAYQPAA SALRTNQWSL AGDWTVEAER AVLNSANGRI AYRFQARDLH LVLGPAANRK PVRFRVLVDG KPPLADHGSD TDVQGYGVID AQKLYQLVRQ AEGSRERLFE IEFLDAGAQA YAFTFG
|
| |