Gene Vapar_4362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4362 
Symbol 
ID7970553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp4609212 
End bp4609904 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content71% 
IMG OID644794951 
ProductPhosphoglycerate mutase 
Protein accessionYP_002946239 
Protein GI239817329 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.965352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACGC CTTCACCCGA CTCCGCGACC GAACTCATCC TGATCCGCCA CGGCGAAACC 
GCCTGGAACC GCGAGCTGCG CTTCCAGGGG CATGCCGACG TGCCGCTCAA CGACATCGGC 
CACGAGCAGG CGCGCCGCCT CGGGCTGCGG CTGGCGGGCG ACACCGCGCA GCACATCATC 
AGCAGCGACC TCATGCGCGC GCAGCAGACC GCCGCGCCGG CCGCGCAGCA GCTGTCGCTG 
CCGGTGGTCA CGTCGGTGGG CTTGCGCGAG CAGTATTTCG GCATTGTCGA AGGCATGCGG 
GCCGACGAGA TCCAGGCACT GCATCCGCGG GCCTGGGAGC AATGGCTGGA GTTCCGCGAG 
GACCACGCCA TGCCCGAAGG CGAGACGGCG CGCGAATTCC ACACGCGCAT CGTCGCCGCC 
ATCGGTGCGC TGGCGGCTGC GCACCGGGGG CAGCGGCTGG TGGTCGTGAC GCACGGCGGC 
GTGCTCGACA TGGTGTGGCG CACCGCGCGC GGGCTCAGCC TGAGCGGGCC GCGCCAGAGC 
GACATTCCCA ACGCGGGCTT CAACCGCATC CGCATTGCCG ACCCGGCCGT GCCCGACGCC 
ATCGAGATCC TCGACTGGGC CGACACGCGG CACCTGGCCG ACCTGCCGCC GCAGCCGACC 
TACGACCAGC GGCGGCATCT GAAGAAGAGC TGA
 
Protein sequence
MPTPSPDSAT ELILIRHGET AWNRELRFQG HADVPLNDIG HEQARRLGLR LAGDTAQHII 
SSDLMRAQQT AAPAAQQLSL PVVTSVGLRE QYFGIVEGMR ADEIQALHPR AWEQWLEFRE 
DHAMPEGETA REFHTRIVAA IGALAAAHRG QRLVVVTHGG VLDMVWRTAR GLSLSGPRQS 
DIPNAGFNRI RIADPAVPDA IEILDWADTR HLADLPPQPT YDQRRHLKKS