| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4323 |
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| Symbol | |
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| ID | 7970511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4568358 |
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| End bp | 4569617 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794909 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_002946200 |
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| Protein GI | 239817290 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCTG TCGTTCCCAT CCAGCCCGTA CAGCCCGCGG GCGCACCGCA GGCCAACGAC
GTGCTGCACT GGATGCGGCC CGGCCCGCTG CAGCTCGCGG CGCTGCCGCC GCTCTCGCTC
TACATCCATC TGCCCTGGTG CCTGCGCAAG TGCCCCTACT GCGACTTCAA CTCGCACGAG
TGGCGCGCCA CCAACGAGGC CGAGGCCGAG GGCATTCCCG AGTCAGCGTA TCTCGACGCG
CTCATTGCCG ACCTGGACGC CGCGCTGCCG CTCATCTGGG GCCGCACCGT CCACACCATC
TTCATCGGCG GCGGAACGCC GAGCCTTTTT TCGCCCCAGG CCATCGACCG CCTGCTCGGC
GACGTGCGCG CCCGCCTCAA GCTGGCGCCC GAATGCGAGA TCACGCTCGA AGCCAACCCC
GGCACCTTCG AGCGCAACCG CTTCCGCGCC TACCGCAGCG CGGGCGTCAC GCGGCTTTCG
GTGGGCGTGC AGAGCTTCAA CGACGAGCAC CTGAAGGCGC TGGGTCGCGT GCACGACCGC
GCCCAGGCCA TTGCCGCCGT GGAAGAAGCC GCGAGCGCGT TCGACACCTT CAACCTCGAC
CTGATGTATG CGCTGCCGGG CCAGACGCTC GAGGGGCTGG ACGCCGACCT GACCCAGGCG
CTGGCGCTCG CGCCGCCGCA CATCTCGGTG TACCACCTCA CCATCGAACC CAACACCCGG
TTCGCCAAGT TTCCGCCGGC GCTGCCCGAA GACGACCTGG CCTACGCCAT GCTCGACCGC
ATCACCGAGC GAACCGCCGC CAGCGGCATG TCGCGCTACG AAGTGTCGGC CTATGCGCGC
AGCGGCCACG CCTGCGCGCA CAACCTCAAC TACTGGCAGT TCGGCGACTA CCTGGGCATT
GGCGCCGGCG CACACAGCAA GCTGAGCTTC GCGCACCGCA TCGTGCGCCA GGTACGCTTT
CGCGAGCCGC GCCTGTACAT GAACAACGCC CGCGCCGGCG CCGCCGTGGC GCAAAGCGAC
GAAGTGGCGC TGGCCGACCT GCCGTTCGAG TTCATGCTCA ACGCGCTGCG CCTGAAGGAG
GGCTTCACGC TGCCCCAATT CAGCGAACGC ACCGGGCTGG CCATGACCAG CATTCAAAAG
GGCCTGGAGG AAGCCGAGCG CAAGGGCCTC ATCGCGCGCG ACCTGCATCG CGTGTGGCCC
ACCGAGCGCG GGCTGGACTT CCTGAGCGAC CTGCAGTCGC TCTTCCTGCC CGACGAGTGA
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| Protein sequence | MASVVPIQPV QPAGAPQAND VLHWMRPGPL QLAALPPLSL YIHLPWCLRK CPYCDFNSHE
WRATNEAEAE GIPESAYLDA LIADLDAALP LIWGRTVHTI FIGGGTPSLF SPQAIDRLLG
DVRARLKLAP ECEITLEANP GTFERNRFRA YRSAGVTRLS VGVQSFNDEH LKALGRVHDR
AQAIAAVEEA ASAFDTFNLD LMYALPGQTL EGLDADLTQA LALAPPHISV YHLTIEPNTR
FAKFPPALPE DDLAYAMLDR ITERTAASGM SRYEVSAYAR SGHACAHNLN YWQFGDYLGI
GAGAHSKLSF AHRIVRQVRF REPRLYMNNA RAGAAVAQSD EVALADLPFE FMLNALRLKE
GFTLPQFSER TGLAMTSIQK GLEEAERKGL IARDLHRVWP TERGLDFLSD LQSLFLPDE
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