| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4288 |
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| Symbol | |
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| ID | 7971372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4532527 |
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| End bp | 4532844 |
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| Gene Length | 318 bp |
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| Protein Length | 105 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644794874 |
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| Product | Rieske (2Fe-2S) domain protein |
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| Protein accession | YP_002946166 |
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| Protein GI | 239817256 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTGGA TCAAGGTCGC CTCGGCGCAA GAACTGAGCA ACGATGAAGC GAAGACGGTC
GACGTCGCTG GCTACGGGGT TGCGCTGTAC CGGATCGACG ACGAGTTTTT CGCCACAGAC
AGCATGTGCA CCCATGCCAC CGCTCTGCTG TCGGAGGGTT ACGTGGAAGA CGGTTGTGTC
GAATGCCCCC TGCATCAGGG CCGCTTCGAC ATTCGTACGG GCAAAGCGAT GTGTGCGCCG
GTCACCGTGG ACCTGCGCAC CCATGCCGTG AAGCGGGAGG GCGATCACAT CTACGTGTTG
TCGCCTGCCG GCAAATGA
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| Protein sequence | MDWIKVASAQ ELSNDEAKTV DVAGYGVALY RIDDEFFATD SMCTHATALL SEGYVEDGCV
ECPLHQGRFD IRTGKAMCAP VTVDLRTHAV KREGDHIYVL SPAGK
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