| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4285 |
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| Symbol | |
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| ID | 7971369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4527606 |
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| End bp | 4528823 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794871 |
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| Product | (2Fe-2S)-binding domain protein |
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| Protein accession | YP_002946163 |
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| Protein GI | 239817253 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACCCCA TCTCTATTCA GGTCAATGGC CGCGGCTTCA GCCGGCAGGC GGAACCGCGG
ATGCATCTTG GTGACTTCCT GCGGGACGAA CTGCGCCTGA CAGGAACCCA CCTTGGCTGC
GAGCATGGCG TCTGCGGCGC ATGCACGGTG CTCGTCAACG GGCAACCGAC GCGATCGTGC
ATCACTTTCG CCGTGGCATG CGAGGGCCAG GAGGTCACCA CCATCGAGGG CTACGACGAT
GATGCGGTGA TGCAGAAGCT GCGTCCAGCG TTCACGCGCC ATCACGCACT GCAGTGTGGG
TTCTGCACAC CCGGAATGCT CACCACGGCG CGCGACATCG TGCTGCGTCT GCCACACGCC
GACGAGGCGC GCGTGCGCCT CGAGCTGTCC GGTAACCTGT GCCGTTGCAC CGGTTACCAG
GGCATCGTGG ACGCCATCCT GGATGTGCTG CAACAGCAGC GTGACACCCC CGACGCGCAA
GTCGAAAAGC TGCGGCAGAC ACTGAGCTTG CCGCGAACCA TGGCACTGGG CCCGGTCACG
ACACCGAGTC GGGCGCAGCC GTCCGCGCGT TCGTCCGCCA AGCCGCCCAC GGCGGATCCG
GTGGTTGCCG CGGAAATGGC GGAGGTCGAT CCCGTCGCGA TGGCCAAGGC CAAAGCCAAG
GGCAACGCGA TCGAAGTGCA TTTCGATGTG CCCTATCCGG CCGATCAAGT GTGGGAGTTC
ATGGGCGACC TGCCTGCGGT TGCGTCCTGC TTGCCCGGTG CGACCATCGA CTCGCACGAG
GGAGAGAGGG TCAAGGGCAC CATCGCGATC AAGTTCGGTC CGATGTCGGC GGCCTTCGCC
GGTGCGGCGC GGCTGGAGCG TGACGACGCT GCCAGGCGCG CAGTCCTGCG CGGTGCGGGC
CAGGACAGCC TGAGCAAGTC GCGCACCCAG GGAGACATCA CCTATCGCCT GGAAGCACTG
ACGGCCGGCA GCACTCGTGT GCACGTGGAC ATGATCTACG CCCTCCAGGG TCCACTCGCG
CAATTCTCGC GCTCCGGACT CGTGAAGGAT TTCGTGCGCC GCATGGTCGC GGACTTCGGC
AAACAGATCA CGCGAAGGTT GGACGGGCAA ACGGTTGCGT CCAATGAACC ACAACCCACG
GTTTCCGTCG CCGGGATGAT GTGGAGCGTG CTCTGGAGTC GCATCCGTGG CTGGTTTGGA
AAACCGCCGC AGCCCTGA
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| Protein sequence | MNPISIQVNG RGFSRQAEPR MHLGDFLRDE LRLTGTHLGC EHGVCGACTV LVNGQPTRSC
ITFAVACEGQ EVTTIEGYDD DAVMQKLRPA FTRHHALQCG FCTPGMLTTA RDIVLRLPHA
DEARVRLELS GNLCRCTGYQ GIVDAILDVL QQQRDTPDAQ VEKLRQTLSL PRTMALGPVT
TPSRAQPSAR SSAKPPTADP VVAAEMAEVD PVAMAKAKAK GNAIEVHFDV PYPADQVWEF
MGDLPAVASC LPGATIDSHE GERVKGTIAI KFGPMSAAFA GAARLERDDA ARRAVLRGAG
QDSLSKSRTQ GDITYRLEAL TAGSTRVHVD MIYALQGPLA QFSRSGLVKD FVRRMVADFG
KQITRRLDGQ TVASNEPQPT VSVAGMMWSV LWSRIRGWFG KPPQP
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