Gene Vapar_4276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4276 
Symbol 
ID7971360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4517679 
End bp4518434 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content72% 
IMG OID644794863 
ProductAsp/Glu/hydantoin racemase 
Protein accessionYP_002946155 
Protein GI239817245 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.23954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTGC TGCTGATCAA CCCCAACACC TCGCAAAGCG TCTCGGACCT GATCGCGGCC 
GAGGCCCGCC GCGCGGCCGC CGGCGACACG CGCATCGAGG TGCTGACGGC GCCCTTCGGC
GTTGCCTACA TCGAGACCCG GTTCGAGTCG CTGATCGGCG CCTATGCGGC CGCCACGCTG
GCCGCGGAGC ACCACGCGCG GCACGATGCG ATCGTGGTCG CGGCCTTCGG CGACCCCGGC
ATCGACGGCC TGCGCGAGGC GCTCGACATT CCAGTGGTCG GCCTCACCGA GGCCGCGCTG
ATGAGCGCCT GCCTGCTGGG CAAGCGCTTC TCCATCATCG CGATCTCGCG CCGCATCACG
GCCTGGTACC GCGAGTGCGT GCAGGCCAAC GGGCTGCTGG AGCGGCTTGC GAGCATCCGC
AGCCTGGAGG GGCCGCTCAA GGACATCGGC AGCGTGCAGG ACGACCATGG CGAGCGCCTC
GAGGCCCTGT GCATGTCGGC CGTCGAGGAC GACGGCGCAG ACGTGATCAT CATCGCCGGC
GCGCCGCTGG CGGGCCTTGC GCGCTCGATC AAGGACCGGA TCCCGGTGCC CGTGGTGGAC
GGCGTGTCCA GCGCCGTCTG CCATGCGCAG ACGCTCGCAT CGCTGGCGCC CGCGCCGGCG
CGCAGGGGCA GTTTCGCTCC GCCGCCGGTC AAGCCGAACC AGGGGCTGCC CGATGCGCTG
GCGCGCCTCC TGGCCCGCGA TGCCGCCCGC GCCTGA
 
Protein sequence
MNLLLINPNT SQSVSDLIAA EARRAAAGDT RIEVLTAPFG VAYIETRFES LIGAYAAATL 
AAEHHARHDA IVVAAFGDPG IDGLREALDI PVVGLTEAAL MSACLLGKRF SIIAISRRIT
AWYRECVQAN GLLERLASIR SLEGPLKDIG SVQDDHGERL EALCMSAVED DGADVIIIAG
APLAGLARSI KDRIPVPVVD GVSSAVCHAQ TLASLAPAPA RRGSFAPPPV KPNQGLPDAL
ARLLARDAAR A