Gene Vapar_4247 details

Gene Information

• Locus tag: Vapar_4247
• ID: 7971331
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 4489621
• End bp: 4490292
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644794834
• Product: Urease accessory protein UreF
• Protein accession: YP_002946126
• Protein GI: 239817216
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0830] Urease accessory protein UreF

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGATC CCCACAGCCT CCTGCAGCTC ATCTGGCTCG CCTCCCCCGC CCTGCCCGTC 
GGCGGTTTTT CCTATTCGGA AGGCGTCGAG GCGGCCGTCG AATGGGCCGG CATCGATTCG 
GAAGCCAAGG CCATCGAGTG GCTCTCCGAC CAGTTGCACC TGAGCTTCGC GCGCGGCGAC 
CTCGCGCTCG TGGCGCAGGC CATCCCGGCC TGGCGCGCCG GCGACGCGGC GCGCATCCGC 
GAACTCAACA CATGGGTGAT GACCACCCGC GAATCGGCCG AATTCTTCCT GCAGACAGAA 
CAGATGGGCC GCTCCTTCGT CGAATGGCTC AAGCTGCACC ACGACGACAC GGCCGCGGTC 
TTTGCCGGCC TGCCCGCGAG CTATCCCGTC GCCTTTGCCT TTGCCGCGAG CCGCACCGGC 
GCCTCCGTGC ACGACGGCTG CCTGGCCTTC GCCTTCGGCT GGGCCGAGAA CATGGTGGCC 
GCGGCGGTCA AGGCCGTGCC GCTCGGCCAG AGCGCGGGCC AGCGCATCCT GGCGCGGCTC 
GCCAGCGAAA TTCCCGCCGC CGTCGAGCGT GCGATGCACC TCTGCGACGA CGAACGCCAG 
GCCTTTGCGC CCCTGCTGGC CGTGTTGTCG GCACGCCATG AAACACAATA CTCGCGCCTC 
TTTCGAAGCT GA 

 

Protein sequence

MPDPHSLLQL IWLASPALPV GGFSYSEGVE AAVEWAGIDS EAKAIEWLSD QLHLSFARGD 
LALVAQAIPA WRAGDAARIR ELNTWVMTTR ESAEFFLQTE QMGRSFVEWL KLHHDDTAAV 
FAGLPASYPV AFAFAASRTG ASVHDGCLAF AFGWAENMVA AAVKAVPLGQ SAGQRILARL 
ASEIPAAVER AMHLCDDERQ AFAPLLAVLS ARHETQYSRL FRS