Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4224 |
Symbol | |
ID | 7971308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4464624 |
End bp | 4466117 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644794811 |
Product | membrane bound O-acyl transferase MBOAT family protein |
Protein accession | YP_002946103 |
Protein GI | 239817193 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1696] Predicted membrane protein involved in D-alanine export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.187339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTTCA ATTCGTATCC CTTCATTTTT GTCTTCTTCC CGCTGGTACT GATCGGGTTC TTCCTGATCG GCAAGCGCAA CGCCCGGTCC GCCGCGGGCT TTCTCGCCCT GGCCTCGCTG TTCTTCTACG GCTGGTGGAG CGTCAAGGCG CTGCCGCTGC TGGTGGCGTC GATCTGCATC AACTACTGGT TCGGGCTGCG CCTGTCGCCC GCGCCGGAGC GGGACGACCG CAAGCGCAAG TCGCTGCTGG TGCTGGCGCT GGTGGTCAAC CTGGGCGTGC TCGCGGTCTT CAAGTACGCC AACTTCTTCG TCTCGAACGT GAACGACGGG CTGGCCGCGG CGGGCCTGTC GCAGATCCCG CTGCTGCACA TCGTGCTGCC GATCGGCATC TCGTTCTACA CCTTCACGCA GATCGCCTTC CTGGTCGACT GCTGGCAAGG CAAGGTGCAT GAGCGCAGCT TCATCCACTA CGTGCTGTTC GTCACCTACT TTCCGCACCT GATCGCGGGC CCGGTGCTGC ACCACGCGCA GATGATGCCG CAGTTCGCCA ATGCGGCCAC CTACCGGTTC GACCCCAACA AGGTGGCGCT CGGCATTGCG ATCTTCACCT TCGGCCTCGC CAAGAAGCTG CTGATCGCCG ACCCGGTGGG CCAGTACGCC GACATGATGT TCAACGGCGT GCACAAGGGC ATCGAGCCCA CGCTCTACAC CGCATGGTTC GGCGCGCTCG CCTACACGCT GCAGATCTAT TTCGACTTCT CGGGCTATTC GGACATGGCG GTCGGCCTGT CGCTGTGCCT GGGCGTGCAG CTTCCGCTGA ATTTCCGCTC GCCCTACAAG TCGACCAACA TCATCGAATT CTGGCGGCGC TGGCACATCT CGCTGTCGAA CTTCCTGCGC GACTATCTCT ACGTGCCGCT GGGCGGCAAC CGCAAGGGGC CGGCCCGGCG CTACCTGAAC CTGTTCCTCA CGATGCTGCT GGGCGGCCTC TGGCACGGCG CCGCCTGGAC CTTCGTGATC TGGGGCGCGC TGCACGGCGT GTTCCTGATG ATCAACCACC TCTGGAACGC CAAGGTGCGG CGCAACACTC CGGCGGGGCC GGTCGCGCAC GTGCTGGGCT GGTTCGTGAC CTTCCTGTGC GTGGTGCTGG CCTGGATCGT GTTCCGCGCC GACGGCCTGC ACACGGCCAT GGCCATCTAC AAGGGCATGC TCGGCCTGCA TGGCGCACCG CCTTCCGCGT TCAGCGAGCT GGGGCCGGTT CCGTTCCGCA AGCCCGAGTT CTTCCAGACC ATGCTCGTGG GCATCGTCAT CTGCCTCGCA TTGCCGCCGA CGATCACGCT CGAGCGCTGG ATTCCCCACC CGAAGGCGGT GGCGGGGCAG CGCGTCATGG CCTGGTGCTC CTCGGCCGTG CTGGCCATCG GTACCTTCGC GCTCTTCGCC TGGTGCGTCT CGAAGCTGGG CAACTACAGC CCGTTCCTCT ACTTCCAATT CTGA
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Protein sequence | MLFNSYPFIF VFFPLVLIGF FLIGKRNARS AAGFLALASL FFYGWWSVKA LPLLVASICI NYWFGLRLSP APERDDRKRK SLLVLALVVN LGVLAVFKYA NFFVSNVNDG LAAAGLSQIP LLHIVLPIGI SFYTFTQIAF LVDCWQGKVH ERSFIHYVLF VTYFPHLIAG PVLHHAQMMP QFANAATYRF DPNKVALGIA IFTFGLAKKL LIADPVGQYA DMMFNGVHKG IEPTLYTAWF GALAYTLQIY FDFSGYSDMA VGLSLCLGVQ LPLNFRSPYK STNIIEFWRR WHISLSNFLR DYLYVPLGGN RKGPARRYLN LFLTMLLGGL WHGAAWTFVI WGALHGVFLM INHLWNAKVR RNTPAGPVAH VLGWFVTFLC VVLAWIVFRA DGLHTAMAIY KGMLGLHGAP PSAFSELGPV PFRKPEFFQT MLVGIVICLA LPPTITLERW IPHPKAVAGQ RVMAWCSSAV LAIGTFALFA WCVSKLGNYS PFLYFQF
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