| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4206 |
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| Symbol | prfA |
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| ID | 7971943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4447551 |
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| End bp | 4448639 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794792 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_002946085 |
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| Protein GI | 239817175 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGACCT TTCTGCGCCA CCAACTCGAA CGCTATGCCC AGCGCCTGGG CGAACTCGAC
TTCCTGCTTT CGCGCGAAGA CATCATGAGC GACATGGCTC AGTACCGCAC CATCTCGCGC
GAGCACGCCG AGATCACGCA GATCGCGGGC CGCTACGAGC GCTACAAGCA GCGCGAAGCC
GACATCGCCG GCGCGGCCGA AATGCTCGAA GACCCCGACA TGGCCGAGAT GGCCCGCGAA
GAAATCGCCG CCGCGCAGGC CGAGCTCGTG CAGCTCGAGG AAGAGCTGCA GCGCCTGCTG
CTGCCCAAGG ATCCGGACGA CGCGCGCAAC GCCTTCCTCG AAATCCGCGC GGGCACCGGC
GGCGACGAGT CGGCGCTGTT CGCGGGCGAC CTGCTGCGCA TGTACACGCG CTACTGCGAG
CGCGCCGGCT GGCGCTGCGA AGTGGTGAGC GAGAGCGAGA GCGAGCTCGG CGGCTACAAG
GAAGTGGTGA TCCGCATCGC CGGCAACGAC GTCTTCGGCC GCCTGCGCTT CGAATCGGGC
GGCCACCGCG TGCAGCGCGT GCCGGCCACC GAGACCCAGG GCCGCATCCA CACCAGCGCC
TGCACCGTCG CCGTGCTGGC CGAGCCCGAC GAAACCGTGG CAGTGCAGAT CAACCCGGCC
GACCTGCGCA TCGACACCTA CCGCGCGAGC GGCGCCGGCG GCCAGCACAT CAACAAGACC
GACTCGGCCG TGCGCATCAC GCACATTCCA ACGGGCATCG TGGCCGAGTG CCAGGACGAC
CGCAGCCAGC ACCGCAACAA GGCCAAGGCG CTGCAGGTGC TGTCCGCGCG CATCCAGGAA
AAGGACCGCA GCGAGCGCGC CGCCAAGGAC GCCGCCATGC GCAAGGGCCT GATCGGCAGC
GGCGACCGCT CCGACCGCAT CCGCACCTAC AACTTCCCGC AGGGCCGGCT CACCGACCAC
CGCATCAACC TCACGCTCTA CAAGCTGCAG GCCATCATGG AAGGCGACCT CGGCGACGTG
CTCGACGCGC TGCGCGCCGC GCGCGAGGCC GAGCAGCTGG CCGAACTCGA ATCGAGCCTG
CCGGCATGA
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| Protein sequence | MKTFLRHQLE RYAQRLGELD FLLSREDIMS DMAQYRTISR EHAEITQIAG RYERYKQREA
DIAGAAEMLE DPDMAEMARE EIAAAQAELV QLEEELQRLL LPKDPDDARN AFLEIRAGTG
GDESALFAGD LLRMYTRYCE RAGWRCEVVS ESESELGGYK EVVIRIAGND VFGRLRFESG
GHRVQRVPAT ETQGRIHTSA CTVAVLAEPD ETVAVQINPA DLRIDTYRAS GAGGQHINKT
DSAVRITHIP TGIVAECQDD RSQHRNKAKA LQVLSARIQE KDRSERAAKD AAMRKGLIGS
GDRSDRIRTY NFPQGRLTDH RINLTLYKLQ AIMEGDLGDV LDALRAAREA EQLAELESSL
PA
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