Gene Vapar_4190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4190 
Symbol 
ID7971927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4435366 
End bp4435875 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID644794776 
ProductCheW protein 
Protein accessionYP_002946069 
Protein GI239817159 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGA TCATGACCCC CCCACAACAC CGGGGCGCCG CGGCGCCTGC CACCTCGAGC 
CGGCTGGAGG TAGTGACCTT CACGCTGGGC CAGGAGGAAT ACGGCATCGA CATCCAGAAG
GTGCAGGAGC TGCGCGGCTA CGACGCGGTG ACGCGCATCG CGAACGCGCC GGAGTACATC
AAGGGCGTGG TGAACCTGCG CGGGATCATC GTTCCGATCA TCGACATGCG CATCAAGTTC
AGGCTGGGCA CGCCCAGCTA CGACCAGTTC ACGGTGGTGA TCGTGCTGAA CATCGCGGGT
CGCGTGGTGG GCATGGTGGT GGACAGCGTG TCGGACGTGA TCACGCTGAG CGCGGAGCAG
ATCAAGCCGG CGCCGGAGAT GGGCTCGGTG CTGGACACCG ACTACCTGAT CGGCCTGGGC
ACGCTGGACG AGCGGATGCT GATCCTGGTG GACATCGACC GGCTGATGTC CAGCGACGAG
ATGGGCCTGG TCGAAAAGAT CGCCGCCTGA
 
Protein sequence
MAEIMTPPQH RGAAAPATSS RLEVVTFTLG QEEYGIDIQK VQELRGYDAV TRIANAPEYI 
KGVVNLRGII VPIIDMRIKF RLGTPSYDQF TVVIVLNIAG RVVGMVVDSV SDVITLSAEQ
IKPAPEMGSV LDTDYLIGLG TLDERMLILV DIDRLMSSDE MGLVEKIAA