Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4190 |
Symbol | |
ID | 7971927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4435366 |
End bp | 4435875 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644794776 |
Product | CheW protein |
Protein accession | YP_002946069 |
Protein GI | 239817159 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAGA TCATGACCCC CCCACAACAC CGGGGCGCCG CGGCGCCTGC CACCTCGAGC CGGCTGGAGG TAGTGACCTT CACGCTGGGC CAGGAGGAAT ACGGCATCGA CATCCAGAAG GTGCAGGAGC TGCGCGGCTA CGACGCGGTG ACGCGCATCG CGAACGCGCC GGAGTACATC AAGGGCGTGG TGAACCTGCG CGGGATCATC GTTCCGATCA TCGACATGCG CATCAAGTTC AGGCTGGGCA CGCCCAGCTA CGACCAGTTC ACGGTGGTGA TCGTGCTGAA CATCGCGGGT CGCGTGGTGG GCATGGTGGT GGACAGCGTG TCGGACGTGA TCACGCTGAG CGCGGAGCAG ATCAAGCCGG CGCCGGAGAT GGGCTCGGTG CTGGACACCG ACTACCTGAT CGGCCTGGGC ACGCTGGACG AGCGGATGCT GATCCTGGTG GACATCGACC GGCTGATGTC CAGCGACGAG ATGGGCCTGG TCGAAAAGAT CGCCGCCTGA
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Protein sequence | MAEIMTPPQH RGAAAPATSS RLEVVTFTLG QEEYGIDIQK VQELRGYDAV TRIANAPEYI KGVVNLRGII VPIIDMRIKF RLGTPSYDQF TVVIVLNIAG RVVGMVVDSV SDVITLSAEQ IKPAPEMGSV LDTDYLIGLG TLDERMLILV DIDRLMSSDE MGLVEKIAA
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