| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4141 |
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| Symbol | flhA |
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| ID | 7971878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4383938 |
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| End bp | 4386031 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794727 |
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| Product | flagellar biosynthesis protein FlhA |
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| Protein accession | YP_002946020 |
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| Protein GI | 239817110 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.303073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCA TGGCCACCCT CACGCGCCTG CAGTCGCAAC TGTTCTCCGG CAGCCAGTGG
AAGGGCCTTG CCGGCCCCAT CCTGATCGTG CTGATCCTGA GCATGATGGT GCTGCCGCTG
CCGCCCTTCC TGCTGGACCT GCTGTTCACC TTCAACATCG CGATGTCGGT GATGGTGCTG
CTGGTGAGCA TGTACACCAT GAAGGCGTTG GACTTCGCGG CCTTTCCGGC CGTGCTGCTT
TTCTCCACGC TGCTGCGCCT GTCGCTCAAC GTGGCCTCCA CGCGCGTGGT GCTGATGCAC
GGCCACACCG GGCCGGACGC GGCGGGCAAG GTGATCGAGG CCTTCGGCCA CTTCCTGGTG
GGCGGCAACT TTGCCGTGGG CGTGATGGTG TTCATCATCC TGGTGCTGAT CAACTTCATG
GTGATCACCA AGGGCGCGGG GCGCATCGCC GAGGTCGGCG CGCGCTTCAT GCTCGATGCG
ATGCCGGGCA AGCAGATGGC GATCGACGCC GACCTGAACG CCGGCCTGAT CGGCGAAGAG
GTGGCGCGCA AGCGCCGCCA GGAAGTCGCG CAGGAAGCCG ACTTCTACGG CTCGATGGAC
GGCGCCAGCA AGTTCGTGCG CGGCGACGCG ATTGCCGGCC TGCTGATCAT GGTGATCAAC
ATCATCGGCG GCCTGGTGGT CGGCATGCTG CAGCACGGGC TGGACTTCGG CACCGCGGGC
ACGACCTACA CGCTGCTGGC CATCGGCGAC GGCTTGGTGG CGCAGATTCC GGCGCTGGTG
ATCTCGACCG CCGCGGGCGT GATCGTCTCG CGCGTCACCA CCGACGAAGA CGTGGGCCGG
CAGCTGACCG GCCAGCTGTT CTCCAACCCG CAGGTGCTCT TTCTCACGGC CGGCCTGATC
GGGCTGATGG GGATGATCCC CGGCATGCCG AACCTGGCCT TCCTGCTGAT CGCGGGCAGC
CTCGCGTGGC TGGGCCGGCG CATGCTCAAG CGCGCGCCGC AGGCCACGGC CGAACAGGCC
GCAGCAGCCC AGGCCGCGGC CATGCCGTCG GCCGAGGCAC CCGAGGCGAC CTGGGACGAC
GTGGCGCTGG TCGACCCGCT CGGCATGGAG GTCGGCTACC GGCTGATCCC GCTGGTGGAC
CAGACCCAGA ACGGCGAGCT GCTGGGCCGC ATCAAGAGCA TCCGCAAGAA GGTGGCCCAG
GAGATCGGCT TCCTGGCGCC GGTGGTGCAC ATCCGCGACA ACCTGGAGAT CCCGCCCAAC
ACCTACGTGA TCAGCCTGAA GGGCGTGGAA ATCGGCCGCG GCGAGGCCTT CCCCAACCAG
TGGATGGCCA TCAACCCCGG CCAGGTGAGC GGCACCCTGC CCGGCACGCC GACGCAGGAC
CCGGCCTTCC ACCTGCCCGC GGTGTGGATC GACGCCAGCC TGCGCCAGGA AGCGCAGGTG
CTCGGCTACA CGGTGGTCGA TGCCTGCACG GTGATGGCCA CGCACCTGAA CCACCTGATC
CAGACCCATG CCGCCGAGCT GCTCGGCCGC CAGGAAGTGC AGCAGCTGCT CGACCAGATC
GGCAAGACTG CGCCCAAGCT CACCGAGGAC CTGGTGCCCA AGGTCATCTC GCTGAGCACG
CTGCACAAGG TGCTGCAGAA CCTGCTTGAC GAAGAGGTGC CGATCCGCGA CATGCGCACC
ATCCTCGACG TGATGGCCGA GCACGCGCCC ACCGTCAAGG ACGCGGCCGA GCTCACCTCG
CTCACGCGCC TGGCGCTCGG CCGCGCGATC ACGCAGCAGC TGTTCCCGGG CGATTCCGAG
CTGCAGGTGA TCGGCCTGGA CAGCGCGCTC GACAGCGTGC TCCAGCAGGC GCTCACCAAC
AACAACGGCA TCGAGCCGGG TCTTGCCAAC AGCCTGATGC AGCAGACCCG CGCCGCCATC
GCGCGCCAGG AACAGCTGGG CCTGGCGCCG GTGCTGGTCG TCCAGCATTC GCTGCGCGTG
CTGCTCTCGC GCTTCCTGCG CCGCAGCTTC CGCCAGCTCA AGGTTCTCTC GCATGCAGAG
ATTCCTGACA CCCGCAACAT CAAGATCACC GCCACCATCG GAGGAAGAGT TTGA
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| Protein sequence | MNAMATLTRL QSQLFSGSQW KGLAGPILIV LILSMMVLPL PPFLLDLLFT FNIAMSVMVL
LVSMYTMKAL DFAAFPAVLL FSTLLRLSLN VASTRVVLMH GHTGPDAAGK VIEAFGHFLV
GGNFAVGVMV FIILVLINFM VITKGAGRIA EVGARFMLDA MPGKQMAIDA DLNAGLIGEE
VARKRRQEVA QEADFYGSMD GASKFVRGDA IAGLLIMVIN IIGGLVVGML QHGLDFGTAG
TTYTLLAIGD GLVAQIPALV ISTAAGVIVS RVTTDEDVGR QLTGQLFSNP QVLFLTAGLI
GLMGMIPGMP NLAFLLIAGS LAWLGRRMLK RAPQATAEQA AAAQAAAMPS AEAPEATWDD
VALVDPLGME VGYRLIPLVD QTQNGELLGR IKSIRKKVAQ EIGFLAPVVH IRDNLEIPPN
TYVISLKGVE IGRGEAFPNQ WMAINPGQVS GTLPGTPTQD PAFHLPAVWI DASLRQEAQV
LGYTVVDACT VMATHLNHLI QTHAAELLGR QEVQQLLDQI GKTAPKLTED LVPKVISLST
LHKVLQNLLD EEVPIRDMRT ILDVMAEHAP TVKDAAELTS LTRLALGRAI TQQLFPGDSE
LQVIGLDSAL DSVLQQALTN NNGIEPGLAN SLMQQTRAAI ARQEQLGLAP VLVVQHSLRV
LLSRFLRRSF RQLKVLSHAE IPDTRNIKIT ATIGGRV
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