| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4138 |
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| Symbol | |
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| ID | 7971875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4379396 |
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| End bp | 4380145 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794724 |
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| Product | glycerophosphoryl diester phosphodiesterase |
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| Protein accession | YP_002946017 |
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| Protein GI | 239817107 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCAC GGATGAAGCC CTGGCCCTAT CCGCGCTGGA TCGCGCACCG CGGCGCCGGC
AAATTGGCGC CCGAGAACAC GCTGGCGGCC TTCCGCCTTG GCGCGGCGCA CGGCTATCGC
ATGTTCGAGT GCGATGCGAA GCTCAGCGCC GACGGCGTGG CCTTTCTGAT GCACGACGCC
ACGCTCGACC GCACCACCAA CGGCCGCGGC ACCGGCGGTG CGCAGCCCTG GAGCGCGCTG
GCTCAGCTCG ACGCCGGCGG ATGGCATTCG CGCGCCTTCG CGGGCGAGCC GCTTGCCACG
CTCGAGAACC TCGCGCGCTT CTGCCTGGCC AACGGCCACC TGCTCAACAT CGAGATCAAG
CCCACACCGG GCACCGAACG CGAAACCGGC GAAGCGGTGG CGCGGCTCGC GGCCCGGCTG
TGGCAGGGCG CGGCCATACC GCCGCTGCTC ACCTCGTTCC AGGCCGAATC GCTCGCGGGC
GCCAGGGCGG TGCAGCCCGA GCTGCCGCGC GGGCTGCTGC TCGACACGCT GCGGGACGGC
TGGCTGGCCG CGGCCACCGG CCTGGACTGC GCCGCGGTGG TCTGCAACCA CGCGCTCTGG
GACGCCGCCA CGGTGGCGCA GGTGCAAGGC GCGGGCATGC GCGCGCTGAG CTACACCGTG
AATGACGAAT GGGCCGCCGA GCGGCTCGTC GAGCTGGGCA CCGACGGCAT CATCACCGAC
CGGGTCGACC TGTTCAGCCC GGCCGGTTGA
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| Protein sequence | MPARMKPWPY PRWIAHRGAG KLAPENTLAA FRLGAAHGYR MFECDAKLSA DGVAFLMHDA
TLDRTTNGRG TGGAQPWSAL AQLDAGGWHS RAFAGEPLAT LENLARFCLA NGHLLNIEIK
PTPGTERETG EAVARLAARL WQGAAIPPLL TSFQAESLAG ARAVQPELPR GLLLDTLRDG
WLAAATGLDC AAVVCNHALW DAATVAQVQG AGMRALSYTV NDEWAAERLV ELGTDGIITD
RVDLFSPAG
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