| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4132 |
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| Symbol | |
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| ID | 7971869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4369522 |
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| End bp | 4373400 |
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| Gene Length | 3879 bp |
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| Protein Length | 1292 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794718 |
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| Product | FAD linked oxidase domain protein |
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| Protein accession | YP_002946011 |
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| Protein GI | 239817101 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.48543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCTC CGACCGCGTT GACCACGCTG TTGTCGCAGG CCGCAGAGCC TGTACGACTG
CGCGAGATCC CCTATAACTA CACCAGCTTT TCCGATCGAG AGATCGTGAT CCGCCTGCTG
GGCGAGCGCG GCTGGGAACT GCTCCAGACC CTGCGCGCCG AGCGCCGCAC CGGCCGGTCG
GCGCGCATGC TCTACGAAGT GCTCGGCGAC ATCTGGGTGG TCCAGCGCAA CCCCTACCTC
GTCGACGACC TGCTCGACAA CCCGCGCCGC CGCGGCCAGC TGGTCGATGC GCTCAGGCAC
CGCCTGGCCG AAGTCCAGAA GCGCCGCACC CCCGACAGCG ACCTGCCGCG CGACCAGCTC
GTGGGCGAAC TCACGGGCCT TGTCGGCCAG GCCGTCGCGG CCTTCGACAC CGCCTTTCGC
GACGTGGCGG CCCTGCGCCG CAAGGCCACG CGCGTACTGG GCCGCCTCAC GGCCAAGGAC
AACATCAAGT TCGACGGCCT CTCGCGCGTC TCGCACGTCA CCGACGCCAC CGACTGGCGC
GTCGAATATC CCTTCGTGGT GCTGTGCCCT GACACCGAGG CCGAGATGGC CCTGCTCGTC
AAGGGCTGCA TCGAGCTGGG CCTCACCATC ATCCCGCGCG GCGGCGGCAC CGGCTACACC
GGCGGCGCGA TCCCGCTCAC CTGGAAGAGC GTGGTCATCA ACACCGAGAA GCTCGAGGCC
ATGACCGAGG TCGAGATGGT TCCGCTGCCC GGCCTCGACA ACCCCGTGCC CACCATCTGG
ACCGAAGCCG GCGTCGTCAC CCAGCGCGTG GCCGACGCCG CCGAGCGCGC CGGCTACGTG
TTCGCGGTCG ACCCCACTTC CGCCGAGGCC TCGTGCGTGG GCGGCAACGT GGCCATGAAC
GCGGGCGGCA AGAAAGCCGT GCTCTGGGGC ACGGCGCTCG ACAACCTGGC TTCGTGGCGC
ATGGTCACGC CGCAGGCCGA ATGGCTCGAA GTCACGCGCA TCGGCCATAA CCTCGGCAAG
ATCCACGACG CCGAGAGCGC CGAGTTCGAA CTGCAGTACT ACGCCGCCGA CGGCAAGACG
AAATTGCGCA CCGAGCGCCT CGACATTCCC GGCCGCACCT TCCGCAAGGA AGGCCTCGGC
AAGGACGTGA CCGACAAGTT CCTTTCGGGC CTGCCCGGCA TCCAGAAAGA GGGCTGCGAC
GGCCTCATCA CCAGCTGCCG CTGGGTGGTG CACCGCATGC CGGCGCACAC CCGCACCGTG
TGCCTCGAAT TCTTCGGCAA CGCGAAGGAC GCGGTGCCCA GCATCGTCGA GATCAAGGAC
TTCATGTTCG CCGAGCAGAA GCGCTCCGGC GTGCTGCTCG CGGGCCTCGA GCACCTGGAC
GACCGCTACC TGAAGGCCGT GGGCTACGCC ACCAAGTCGA AGAAGCATGG CGGCCTGCCC
AAGATGGTGC TGTTCGGCGA CATCGCGGGC GACGACGCCG ATGCGGTGGC GCGCGTCACC
TCCGAAGTGG TGCGCATCGC CAATTCGCGC AGCGGCGAAG GCTTCGTCGC CATCAGCCCC
GAGGCGCGCA AGAAATTCTG GCTCGACCGC AAGCGCACCG CGGCCATCAG CAAGCACACC
AACGCCTTCA AGATCAACGA GGACGTGGTC ATCCCGCTGC CGCGCATGGC CGAGTACAGC
GACGGCATCG AGCGCATCAA CATCGAGCTC TCGCTGCAGA ACAAGCTCGC GCTCACCGAC
GCGCTCGAAG CCTTCCTGCT GCGCGGCAAC CTGCCGCTCG GCAAGACCGA CGACGCGCAC
GAGATCCCGG CCGCCGAGCT GCTCGAAGAC CGCGTCGCGC AGGCCGTGGC GCTGGTGCAG
GGCGTGCGTG CGCTCTGGGC CGAATGGCTG CGCGACGTTG ACACGCTGTT CCCGCAGCTG
CAGGACCACA CGCTGCGCGC CAGCTGGAAG ACCCAGCTGC GCCAGCCGCT GCAGGAAATC
TTCTCGGGCG CCGAGTTCAC GCCGATCCTG GCCGAGTGCA CCGCCATCCA CCAGCAGGTG
CTCAAGGGCC GCGTCTGGGT GGCGCTGCAC ATGCACGCGG GCGACGGCAA CGTGCACACC
AACATCCCGG TGAACAGCGA CAACTACGAG ATGCTGCAGA CCGCGCATGC CGCGGTGGTG
CGCATCATGG CGCTGGCGCG CAGCCTCGAC GGCGTGATCT CGGGCGAGCA CGGCATCGGC
ATCACCAAGC TCGAATTCCT GAGCGACGAA GAGCTCGCGC CCTTCATGGA CTACAAGCGC
CGCGTCGACC CCGAAGGCCG CTTCAACAAG GGCAAGCTGC TGCGCGCCCC CGCCGGCGAA
GCCGCGCTGC CGCATGCCGA CCTGACCAAC GCCTACACGC CGAGCTTCGG CCTCATGGGC
CATGAGTCGC TCATCATGCA GCAGAGCGAC ATCGGCGCCA TTGCCGACAG CGTGAAGGAC
TGCCTGCGCT GCGGCAAGTG CAAGCCGGTG TGCGCCACCC ACGTGCCGCG CGCCAACCTG
CTGTACAGCC CGCGCAACAA GATCCTTGCA ACCTCGCTGC TGGTCGAAGC CTTCCTGTAT
GAAGAGCAGA CCCGGCGCGG CATCAGCATC AAGCACTGGG AAGAGTTCGA GGACGTGGCC
GACCACTGCA CGGTCTGCCA CAAGTGCCTC ACGCCCTGCC CGGTGAAGAT CGACTTCGGC
GACGTGTCGA TGAACATGCG CAACCTGCTG CGCAAGATGG GGCAAAAGAG CTTCCGGCCC
GGCAATGCGG CCGCGATGTT CTTCCTCAAC GCGACCAATC CGCAGACCAT CAAGGCGGTG
CGCGCGGGCA TGGTGGGCAT CGGCTTCAAG GCGCAGCGCC TGGCCAACGA TCTGCTGCGC
GGCCTCGCGA GGAAGCAGAC CGCCGCGCCG CCCGCCACGC TCGGCCCGGC GCCGGTCAAG
GAGCAGGTGA TCCACTTCAT CAACAAGAAG ATGCCGGGCA ACCTGCCCAA GCAGACGGCG
CGCGCGCTGC TCGACATCGA GGATGCCGAC TACGTGCCGA TCATCCGCGA CCCGAAGGCC
ACCACCTCGG AGACCGAGGC GGTCTTCTAC TTTCCCGGCT GCGGTTCGGA GCGCCTCTTC
TCGCAGGTGG GCCTTGCCAC GCAGGCCATG CTCTGGCACG CGGGCGTGCA GACGGTGCTG
CCGCCCGGCT ACCTGTGCTG CGGCTATCCG CAGCGCGGCA GCGGCCAGTT CGACAAGGCC
GAGAAGATGA TCACCGACAA CCGCGTGCTG TTCCACCGCG TGGCCAACAC GCTCAACTAC
CTCGACATCA AGACGGTGGT GGTGAGCTGC GGCACCTGCT ACGACCAGCT GCAGGGCTAC
CAGTTCGACA AGATCTTCCC GGGCTGCCGC ATCATCGACA TCCACGAGTA CCTGCTCGAA
AAGGGCATCA CGCTGGCCGA TGCAGGCGGT GGCGGCTACC TCTACCACGA CCCCTGCCAC
AGCCCGATGA AGCTGCAGGA CCCGATGAAG ACCGTCAAGG CGCTGGTCGG CGACAACGTG
CTCAAGAACG ACCGCTGCTG CGGCGAATCG GGCACGCTGG GCGTCTCGCG GCCCGACATC
TCGACGCAGA TCCGCTTCCG CAAGGAGGAA GAGCTCAAGA AGGGCGAGGC CGCCCTGCGC
GCGAACGGCC AGGTCGGCGA AAAGGACAAC GTCAAGATCC TGACCAGCTG CCCGAGCTGC
CTGCAAGGCC TCTCGCGCTA CGGCAACGAC CTGAACAACG GCCTGCTCGA AGCCGACTAC
ATCGTGGTCG AGATGGCCAA CAAGATCCTC GGCAAGGACT GGATGCCCGA ATACGTGGCC
GCCGCGAACC AAGGCGGCAT CGAGCGGGTG CTCGTATGA
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| Protein sequence | MNAPTALTTL LSQAAEPVRL REIPYNYTSF SDREIVIRLL GERGWELLQT LRAERRTGRS
ARMLYEVLGD IWVVQRNPYL VDDLLDNPRR RGQLVDALRH RLAEVQKRRT PDSDLPRDQL
VGELTGLVGQ AVAAFDTAFR DVAALRRKAT RVLGRLTAKD NIKFDGLSRV SHVTDATDWR
VEYPFVVLCP DTEAEMALLV KGCIELGLTI IPRGGGTGYT GGAIPLTWKS VVINTEKLEA
MTEVEMVPLP GLDNPVPTIW TEAGVVTQRV ADAAERAGYV FAVDPTSAEA SCVGGNVAMN
AGGKKAVLWG TALDNLASWR MVTPQAEWLE VTRIGHNLGK IHDAESAEFE LQYYAADGKT
KLRTERLDIP GRTFRKEGLG KDVTDKFLSG LPGIQKEGCD GLITSCRWVV HRMPAHTRTV
CLEFFGNAKD AVPSIVEIKD FMFAEQKRSG VLLAGLEHLD DRYLKAVGYA TKSKKHGGLP
KMVLFGDIAG DDADAVARVT SEVVRIANSR SGEGFVAISP EARKKFWLDR KRTAAISKHT
NAFKINEDVV IPLPRMAEYS DGIERINIEL SLQNKLALTD ALEAFLLRGN LPLGKTDDAH
EIPAAELLED RVAQAVALVQ GVRALWAEWL RDVDTLFPQL QDHTLRASWK TQLRQPLQEI
FSGAEFTPIL AECTAIHQQV LKGRVWVALH MHAGDGNVHT NIPVNSDNYE MLQTAHAAVV
RIMALARSLD GVISGEHGIG ITKLEFLSDE ELAPFMDYKR RVDPEGRFNK GKLLRAPAGE
AALPHADLTN AYTPSFGLMG HESLIMQQSD IGAIADSVKD CLRCGKCKPV CATHVPRANL
LYSPRNKILA TSLLVEAFLY EEQTRRGISI KHWEEFEDVA DHCTVCHKCL TPCPVKIDFG
DVSMNMRNLL RKMGQKSFRP GNAAAMFFLN ATNPQTIKAV RAGMVGIGFK AQRLANDLLR
GLARKQTAAP PATLGPAPVK EQVIHFINKK MPGNLPKQTA RALLDIEDAD YVPIIRDPKA
TTSETEAVFY FPGCGSERLF SQVGLATQAM LWHAGVQTVL PPGYLCCGYP QRGSGQFDKA
EKMITDNRVL FHRVANTLNY LDIKTVVVSC GTCYDQLQGY QFDKIFPGCR IIDIHEYLLE
KGITLADAGG GGYLYHDPCH SPMKLQDPMK TVKALVGDNV LKNDRCCGES GTLGVSRPDI
STQIRFRKEE ELKKGEAALR ANGQVGEKDN VKILTSCPSC LQGLSRYGND LNNGLLEADY
IVVEMANKIL GKDWMPEYVA AANQGGIERV LV
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