| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4130 |
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| Symbol | |
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| ID | 7971867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4368675 |
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| End bp | 4369088 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794716 |
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| Product | protein of unknown function DUF971 |
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| Protein accession | YP_002946009 |
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| Protein GI | 239817099 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3536] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.178996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGGTT TGCAAGCCGG CGCACCGACG CCGCAATCGA TCACCGTGCA CGGCCAGTCG
CGCGTGCTCG AGGTCGGCTT CTCGGACGGC GCGAGCTTCC GCATTCCGTT CGAGCTGATG
CGCATCTATT CGCCATCGGC CGAGGTGCAG GGCCACGGCC CCGGCCAGGA AGTGCTGCAG
ACCGGCAAGC GCGAGGTCGA GCTGGTCGAC CTGAAGCCGG TCGGCAACTA CGCCGTGCAG
CCGGTCTTCA GCGACGGCCA TGACACCGGC ATCTTCTCGT GGAACCTGCT GTACGAGCTC
GGCGCCAACC AGGCCGCGCT CTGGGCCGAA TACGAGCGCC GGCTTGCCGC CGCGGGCGTC
GACCGCGACG CGCCGATGAT CGACAAGGGC GGCTCCGCCT GCGGCAGCCA CTGA
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| Protein sequence | MAGLQAGAPT PQSITVHGQS RVLEVGFSDG ASFRIPFELM RIYSPSAEVQ GHGPGQEVLQ
TGKREVELVD LKPVGNYAVQ PVFSDGHDTG IFSWNLLYEL GANQAALWAE YERRLAAAGV
DRDAPMIDKG GSACGSH
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