| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4105 |
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| Symbol | |
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| ID | 7974427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4347505 |
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| End bp | 4348260 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794691 |
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| Product | UBA/THIF-type NAD/FAD binding protein |
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| Protein accession | YP_002945984 |
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| Protein GI | 239817074 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.129718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGATC ACGACCTGCT GCGCTATTCG CGGCACATTC TTCTCGAGGA GTTCGGCATC
GACGGCCAGG CGCGCGTCGG TGCCGGCCAC GCGCTGGTGA TCGGCGCGGG CGGCCTGGGC
TCCCCGGTTG CGCTGTATCT CGCGGCCGCC GGCGTCGGGC ACATTGCCCT TGTGGACGAC
GACGAGGTCG ATCTCACCAA CCTGCAGCGC CAGGTCGCCC ATACCAACGA CCGCGTGGGC
CGGCTCAAGG TCGAATCGGC CGCCGAGGCC ATGCGCGCCA TCAACCCCGA CATTGCCATC
GAGACGCACG CCCTGCGCGC CGACGAGGCG CTGCTTTCGC GCCTGGTCGC GGCCGCGGAC
GTGGTGGTCG ACTGCTGCGA CAACTTTGCC ACGCGGCACG CCGTCAATCG CGCCTGCGTG
GCGCATGGCA AGCCGCTGGT GGCGGGCGCC GCGATCCGCT TCGACGGCCA GCTGAGCGTG
TACGACACGC GCGATGCAGC CTCGCCCTGC TATGCCTGCA TCTTTCCGCC CGACGCGGCC
TTCGAGGAAA CGCGCTGCGC GGTGCTTGGC GTGTTCGGCC CGGTGGTCGG CACCATCGGC
ACGCTGCAGG CCAGCGAAGC GCTGAAGCTG CTCGCGGGCA TCAGGCCCTC GCTGGCAGGC
AAGCTCCTGA TGTTCGACGG GCGGCGCACC GCCTTCGATA CGCTGAAGAT CGCGCGCGAT
CCGCACTGCA GCGTGTGCGC GCAGCGCCCG GCCTGA
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| Protein sequence | MDDHDLLRYS RHILLEEFGI DGQARVGAGH ALVIGAGGLG SPVALYLAAA GVGHIALVDD
DEVDLTNLQR QVAHTNDRVG RLKVESAAEA MRAINPDIAI ETHALRADEA LLSRLVAAAD
VVVDCCDNFA TRHAVNRACV AHGKPLVAGA AIRFDGQLSV YDTRDAASPC YACIFPPDAA
FEETRCAVLG VFGPVVGTIG TLQASEALKL LAGIRPSLAG KLLMFDGRRT AFDTLKIARD
PHCSVCAQRP A
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