| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4077 |
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| Symbol | |
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| ID | 7974399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4322128 |
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| End bp | 4322814 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794663 |
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| Product | protein of unknown function DUF480 |
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| Protein accession | YP_002945956 |
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| Protein GI | 239817046 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGG CCCTTCCCAT TCTTTCGCTC GTCGAAACCC GCGTGCTCGG CGTGCTGGCC
GAGAAGCAGC GCACCGTGCC CGACAGCTAT CCGCTGACGC TCAATTCGCT GGTGTCCGGC
TGCAACCAGA AGACCAGCCG CAACCCGGTG CTCGAACTGA GCGAGGCCCA GGTGCAGGCC
GCCATCGACA GCCTCAAGGG CTACAGCCTG GTGGCCGAAA CCAGCGGCGG CCGGGCGTTC
CGCTACGAGC ACAACATCGA CCGCGTGCTG CGCATTCCGT CGCAGTCGGT GATCCTGCTC
ACGGTGCTGA TGCTGCGCGG CCCGCAAACG GCGGGTGAAC TGCGCATCGC TTGCGACCGC
ATGCACAACT TCGCGGACAT TTCGTCGGTC GAGGGTTTTC TCGACGAGCT CGCCGAGCGC
TCGGCCGGCG CGCTGGTGGT GAAGCTCGCG CGGCTGCCGG GCGCGCGCGA AAGCCGCTGG
GCGCATCTTT TGAGCGGCGC GCCGGCGGAA GAGCTTGCGG GGCCGGGTGG TGCATCGGCC
GACGGGGCGT ATGCATCGCA CGATGCATCG CTCGGCGAGG TGGCCGCGCT CAAGGCCAAC
GTGGCGCGGC TCGAGGCCGA GCTCGCGTCG CTGAAGGCGC TGGTGGGGCG GGTGTGCTCG
GAGCTTGGGA TTTCCGACGC GGGGTAG
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| Protein sequence | MTQALPILSL VETRVLGVLA EKQRTVPDSY PLTLNSLVSG CNQKTSRNPV LELSEAQVQA
AIDSLKGYSL VAETSGGRAF RYEHNIDRVL RIPSQSVILL TVLMLRGPQT AGELRIACDR
MHNFADISSV EGFLDELAER SAGALVVKLA RLPGARESRW AHLLSGAPAE ELAGPGGASA
DGAYASHDAS LGEVAALKAN VARLEAELAS LKALVGRVCS ELGISDAG
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