Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4055 |
Symbol | |
ID | 7974377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4296163 |
End bp | 4297647 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644794642 |
Product | hypothetical protein |
Protein accession | YP_002945935 |
Protein GI | 239817025 |
COG category | [R] General function prediction only |
COG ID | [COG1106] Predicted ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.945685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTGG CGTCATTCCA GATCACCAAC TTTCGCTCGA TCAACGACAG CGGCTCCATC GACACCTCGC AGATCACCGC GATCCTCGGC CGCAATGACA GCGGCAAATC GAACCTGCTG CGCGCACTGC ACAGCCTGAA CCCCGCCGAA GGCCTGGCCG AACTCAGCCC GATCAAGGAC TTTCCGCGGC ACCGCCGCCT CGAGGAGTGC CAGGGCGATA CGCCGGTCGT CGCGACGCGC TGGGCGCTCG AAGACAGCGA GCGGGCCGAA CTGGTGCAGA TGCTCCCGCG CGCGGCCAAG GTGCGCCACG TCACCGCGGG CCGGGGCTAC GGCACGGCGC GCTGGAGCGG CCTCGAAGGG CTCGGCGACC TCTCGCTCGA CGTGTCCGAC ATCAAGGCCA AGGTCCGCAA GATCGTGCCC GCCGTCAAGG CCGCGGCCGA GAAGCTCGCC GACGACGCAC GCGCGATGCT GGAGCAGGCG GCCGACGCCT TCGACGCCGC GATGATCCTG AGCCCCGACT ACATCCGCTG GTCGGCCGGT GCGGTGGCGG TGCTGCAGTC GCTGCGCAAG GCCATGGCCG CGGCGGATGC CGAGCTCAGC GACAAGCAGG AGCAGATGCT GGCCGAGCTC GAGGAGATGG CCCGCGCGAT TGCCAACGAC ACGCCGGCGC TTGCAAGGGC GAAGCAGTGG GTGCTCGACA AGCTGCCGAG GTTCGTCTAC GTGGACGAGT ACCCGGCGCT GCCCGGCCGC CAGAACATTG CCGAGCACCT CGCGCGCAAG GGCTGGGGGC AGGACGCGCC CGGGCAGCGC AACTTCGAGA AGCTCTGCAA GGCCGCCGGG CTCGATCCGC AGCAGCTGCA GGAGCTGCTG GAGAAGAACG ACCAGGCCAC GCGCAACCAG CTCGCCAACC GCGCCGGCTC CGTCGTCACC GCCGAGATCC GCCGGCTCTG GAAGGACCGC GAGCTCAAGG TGCGCTTCAA CCTGGACGGG CCGTACATGG ACACGCTGGT GTCCGACCCG AACCGTGCCT ACGACGTGGA AGTGAACCTC GACGAGCGCA GCCGCGGCTT CCAGTGGTTC TTCTCGTTCT ACGTCACCTT CTTTGCGGAC ACCAAGGGCG CGGGCGATGC GATCCTGCTG CTGGACGAGC CCGGCCTGCA TCTGCATGCG CGCTCGCAGG CCGACCTGCT CGCGCACTTC GAGCAGGACT TCGCCAACCA GATCGTCTAC ACCACGCACT CGCCGTTCAT GGTGCCCGTG CACCGGCCGG GCGCCGTGCG CACGGCCAGC ATGAGCGAAG CCGCCGGCAC CACCGCGAGC AACAAGGCCG AGGGCGACGC GCGCACGCTC TATCCGCTGC AGGTGGCGCT CGCGCTGAGC CGGATGGCGG GCGAGGGCGC GAAGCCGCAG CAAAGGGAGG GCGCGGCGCG TGTCGAGGCG CCGTCGCGCG AGGTCAGCGA GCCGGTGGAT CTTCCTGTCC AATAG
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Protein sequence | MRLASFQITN FRSINDSGSI DTSQITAILG RNDSGKSNLL RALHSLNPAE GLAELSPIKD FPRHRRLEEC QGDTPVVATR WALEDSERAE LVQMLPRAAK VRHVTAGRGY GTARWSGLEG LGDLSLDVSD IKAKVRKIVP AVKAAAEKLA DDARAMLEQA ADAFDAAMIL SPDYIRWSAG AVAVLQSLRK AMAAADAELS DKQEQMLAEL EEMARAIAND TPALARAKQW VLDKLPRFVY VDEYPALPGR QNIAEHLARK GWGQDAPGQR NFEKLCKAAG LDPQQLQELL EKNDQATRNQ LANRAGSVVT AEIRRLWKDR ELKVRFNLDG PYMDTLVSDP NRAYDVEVNL DERSRGFQWF FSFYVTFFAD TKGAGDAILL LDEPGLHLHA RSQADLLAHF EQDFANQIVY TTHSPFMVPV HRPGAVRTAS MSEAAGTTAS NKAEGDARTL YPLQVALALS RMAGEGAKPQ QREGAARVEA PSREVSEPVD LPVQ
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