| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4041 |
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| Symbol | |
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| ID | 7974607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4283777 |
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| End bp | 4284520 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794628 |
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| Product | ABC transporter related |
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| Protein accession | YP_002945921 |
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| Protein GI | 239817011 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.662899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAC TCCAGAACGT CAACAAGTGG TACGGCAGCT ACCACGCCCT GGTCGACATC
AACGAGACCA TCCGCAAGGG CGAAGTGGTG GTCGTCTGCG GGCCTTCGGG CTCGGGCAAG
TCGACGCTGA TCCGCACCCT CAACCGGCTG GAGCCGATCC AGTCGGGCCG CATCCTCATC
GACGGCAAGG ACATCCATGC GCCGGGCACC GACGTGAATG CGTTCCGCTC GCGCATCGGC
TTCGTGTTCC AGCAGTTCAA CCTGTTTCCG CATCTCACGG TGCTGCAGAA CTGCACGATG
GCGCCGCTGC AGTTGCGCGG CCTCTCGCGG AAGGAGGCCG ACGAGCGCGC CATGGCCCTG
CTGCAGCGCG TGGGCCTGGC CGGCAAGGCG AACGCGTGGC CGAGCGAACT CTCGGGCGGC
CAGCAGCAGC GCGTGGCGAT CGCGCGCGCC CTGGCCATGC AGCCGCCGCT GATGCTGTTC
GACGAACCCA CCAGCGCGCT CGACCCCGAG ATGGTGGGCG AGGTGCTGCT CGTGATGCGC
GACCTCACGC GCGACGGCAT GACCATGGTC TGCGTGACGC ACGAGATGGG CTTTGCGCGC
GAGGTGGCCG ACCGCGTGCT CTTCATGGAC GAAGGCAAGG TGCTCGAGCG CGCCACGCCC
GACGACTTCT TCAACCGGCC GCAGCATCCG CGCGCGCAGC AGTTTCTTTC GGACATCCGC
TCGCCCTTCG CGCGCGGCGC ATGA
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| Protein sequence | MIELQNVNKW YGSYHALVDI NETIRKGEVV VVCGPSGSGK STLIRTLNRL EPIQSGRILI
DGKDIHAPGT DVNAFRSRIG FVFQQFNLFP HLTVLQNCTM APLQLRGLSR KEADERAMAL
LQRVGLAGKA NAWPSELSGG QQQRVAIARA LAMQPPLMLF DEPTSALDPE MVGEVLLVMR
DLTRDGMTMV CVTHEMGFAR EVADRVLFMD EGKVLERATP DDFFNRPQHP RAQQFLSDIR
SPFARGA
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