| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4030 |
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| Symbol | |
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| ID | 7974596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4274483 |
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| End bp | 4275445 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794617 |
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| Product | threonine dehydratase |
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| Protein accession | YP_002945910 |
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| Protein GI | 239817000 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACAACG AAAACACCCA CTGGCGCTCT GAAACCGAGA GCGCCTCCCG CAGGCTGCGC
GAGCGCGCCG GCGGTTTCCT GCGCCAGACC CCGCTCTGGA AGCTGCCGTC CGCGGCCTTT
GGCCTGGCGG CGCCGGGCGT GGAGCTGTGG CTCAAGCTCG AGCACATGCA GGTGAGCGGC
AGCTTCAAGG CGCGCGGCAT GATGAACCGC CTGCTGGCCA ACGACATTCC CGAAAGCGGC
GTGATCGTGG CCTCGGGCGG CAACGCGGGC ATTGCCACCG CGGCGGCGGC CAAGGCGCTG
GGCGTGCGCT GCCAGGTGTT CCTGCCGGGC GTCTCGCCCG AAGCCAAGCG CGCCCGCCTG
AGGGCGCTCG GCGCCGAGGT GGTGGTGGTC GGCGAGCTCT ATCCCGACGC GCTGGCGGCC
TGCCTCGCGC GCCAGGAGGA AACCGGCGCC TTGCTCACGC ATGCCTACGA CCAGCCCGAA
GTCGTGGCCG GCGCGGGCAC GCTCGGCCAG GAGATCGAGG CAGAGGGCGG CCTGCCCGAT
TCCGTGCTCG TGAGCGTGGG CGGCGGCGGC CTGATCGGCG GCCTTGCCGG CTGGTTCGAA
AAGCGCGCCC GCGTGGTGGC GCTCGAGCCC GAAAAGGCGC CCACGCTGTA CCGCGCCCGC
CAGGCCGGCG AGCCGGTCGA CGTCGACGTG GGCGGCATTG CCGCCGATTC GCTCGGCGCG
CGCCGCATCG GCGCCATTTC CTGGGACATC ACCCAGCAAT ACGTGCAGGA CGCGCTGCTC
CTGTCCGACG AATCCATCCG CGCCGCGCAG CAGTGGCTGT GGAAGGAATT GAAGCTCGCC
GTGGAGCCGG CCGCCGCGCT GCCGCTGGCG GCGCTGCAGA CCGGCGCCTA CCTGCCGCGG
GAAGGCGAGA AGGTCTGCCT GATCGTCTGC GGGGCGAATG TCGACCCGGC CACCGTGGCC
TGA
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| Protein sequence | MNNENTHWRS ETESASRRLR ERAGGFLRQT PLWKLPSAAF GLAAPGVELW LKLEHMQVSG
SFKARGMMNR LLANDIPESG VIVASGGNAG IATAAAAKAL GVRCQVFLPG VSPEAKRARL
RALGAEVVVV GELYPDALAA CLARQEETGA LLTHAYDQPE VVAGAGTLGQ EIEAEGGLPD
SVLVSVGGGG LIGGLAGWFE KRARVVALEP EKAPTLYRAR QAGEPVDVDV GGIAADSLGA
RRIGAISWDI TQQYVQDALL LSDESIRAAQ QWLWKELKLA VEPAAALPLA ALQTGAYLPR
EGEKVCLIVC GANVDPATVA
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