| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4021 |
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| Symbol | |
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| ID | 7974586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4265379 |
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| End bp | 4266236 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794607 |
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| Product | PHP domain protein |
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| Protein accession | YP_002945901 |
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| Protein GI | 239816991 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCTCCA TTCTCAATGC CGATCTGCAC TGCCATTCCG TGGTTTCCGA CGGCACATTG
ACGCCCGAAG AATTGGCCGC GCGCGCCGCC GCCAACGGGG TCGAGCTCTG GGCGCTCACC
GACCATGACG AAGTCGGCGG CCAGCACCGC GCGGCCGCCG CGGCGCGCGC CAACGGCATC
CGCTATCTCA CGGGCACCGA GATCTCGGTG ACCTTCGCCA ACGAGACCGT GCACATCGTC
GGCCTGGGCT TCGACCCCGA CGACGCCGCC ATGACGCAGG GCCTCTACGA CACGCGCGGC
GGCCGCGGCA AGCGCGCGCA GGAAATGTCC GAGGGGCTGG CCAAGGTCGG CATCCACGGC
GCCTACGAAG GCGCGCTCAA GTTCGTCGGC AATCCCGAGC TGATCTCGCG CACCCACTTC
GCGCGCTTCC TGGTCGAGCA GGGCCACTGC CGCGACACGC CCGAGGTGTT CCGCAAGTAC
CTGACCGAAG GCAAGCCCGG CTACGTGCCG CACCGCTGGG CCTCGCTCAA GGATGCGGTG
CACTGGATCA CGGCCGCCAA GGGCATGGCC GTCATCGCGC ATCCGGGGCG CTACAAGTTC
ACCGCCAACG AGGAATACGC GCTGTTCCTC GAATTCAAGG CGCATGGCGG GCAGGCGATC
GAGGTCGTCA CCGGCAGCCA CACGACCGCC GAATACATCG AGTACGCCGA CAAGGCGCTC
GAGTTCGATT TCGCCGCCTC GCGCGGCAGC GATTTCCACA GCCCCGACGA AAGCCATTGC
GATCTCGGCA AGCTGCCACC GTTGCCCGGT GCGCTCACGC CGGTGTGGGA ACTGCTCAGC
CACCGCATCC AGCAGTGA
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| Protein sequence | MSSILNADLH CHSVVSDGTL TPEELAARAA ANGVELWALT DHDEVGGQHR AAAAARANGI
RYLTGTEISV TFANETVHIV GLGFDPDDAA MTQGLYDTRG GRGKRAQEMS EGLAKVGIHG
AYEGALKFVG NPELISRTHF ARFLVEQGHC RDTPEVFRKY LTEGKPGYVP HRWASLKDAV
HWITAAKGMA VIAHPGRYKF TANEEYALFL EFKAHGGQAI EVVTGSHTTA EYIEYADKAL
EFDFAASRGS DFHSPDESHC DLGKLPPLPG ALTPVWELLS HRIQQ
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