Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4014 |
Symbol | |
ID | 7974579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4258706 |
End bp | 4259035 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644794600 |
Product | hypothetical protein |
Protein accession | YP_002945894 |
Protein GI | 239816984 |
COG category | [R] General function prediction only |
COG ID | [COG1694] Predicted pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.53344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACCG ATCTGAACAA GCTGAATCAG GCATTGCGCG AGTTCGCCAA GGCCCGCGAC TGGGAGCAGT TCCATTCGCC CAAGAACCTC GCGTCGGCGC TCTCGGTGGA AGCGGCCGAA CTGCTGGAGC ACTTCCAGTG GCTGACCGAA GCGCAGAGCC GCTCGCTCTC GCCCGAGAAG CGCGACGAGG TCGGCGCCGA GATGGCGGAT GTCTTTCTCT ACCTGCTGCA ACTGGCAGAC AAGCTGGGCG TCGACTTGAT CGATGCGGCA CAGCGCAAGA TGCTCGTCAA CGCACAGAAG TACCCGGTCG AAAAAAGAAG CGAGCCCTGA
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Protein sequence | MDTDLNKLNQ ALREFAKARD WEQFHSPKNL ASALSVEAAE LLEHFQWLTE AQSRSLSPEK RDEVGAEMAD VFLYLLQLAD KLGVDLIDAA QRKMLVNAQK YPVEKRSEP
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