Gene Vapar_4014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4014 
Symbol 
ID7974579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4258706 
End bp4259035 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content62% 
IMG OID644794600 
Producthypothetical protein 
Protein accessionYP_002945894 
Protein GI239816984 
COG category[R] General function prediction only 
COG ID[COG1694] Predicted pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.53344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACCG ATCTGAACAA GCTGAATCAG GCATTGCGCG AGTTCGCCAA GGCCCGCGAC 
TGGGAGCAGT TCCATTCGCC CAAGAACCTC GCGTCGGCGC TCTCGGTGGA AGCGGCCGAA
CTGCTGGAGC ACTTCCAGTG GCTGACCGAA GCGCAGAGCC GCTCGCTCTC GCCCGAGAAG
CGCGACGAGG TCGGCGCCGA GATGGCGGAT GTCTTTCTCT ACCTGCTGCA ACTGGCAGAC
AAGCTGGGCG TCGACTTGAT CGATGCGGCA CAGCGCAAGA TGCTCGTCAA CGCACAGAAG
TACCCGGTCG AAAAAAGAAG CGAGCCCTGA
 
Protein sequence
MDTDLNKLNQ ALREFAKARD WEQFHSPKNL ASALSVEAAE LLEHFQWLTE AQSRSLSPEK 
RDEVGAEMAD VFLYLLQLAD KLGVDLIDAA QRKMLVNAQK YPVEKRSEP