| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3977 |
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| Symbol | |
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| ID | 7974542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4220852 |
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| End bp | 4221688 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794563 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945857 |
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| Protein GI | 239816947 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.347525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCATCTT CCAAAGCCTT TCGCATTGCA CTCTCGGCCT CGGCCGCCGC CATTGGCGGC
ATGGCGGCGT ACTGGACCCT TCTTGCCACG CGGCAGGGGC ACATCCTCTT CAACGCCAGG
AAGCTTCCGG TCGTCCACCT GTCCGACGAC TTTTCCACCT ACTCCCACAC CGTGCCGGGC
GGCATGGTGC GCGGCTACGT CTACCACCCG CAGGGCGAAG AAGCGCTGCA GGACCTGTTC
ATCTATTTTG CCGGCCGGGG CGAGGACGTC CGCGCCACCG CGCAGGCGCT GCACTGGCTG
CCGGAGGGCT TCGGATTTGC GGCGGTCAAC TACCGCGGCG TGGCCGACTC CGAAGGGCAT
CCCTCCGAGA TCGCCTCGGT GGCCGATGCG ATCCAGTTTG CCAACCACCT GCGCAAGGCC
TTTCCGCAGG CGCGCCTGCA CGTGGTCGGC CGCAGCCTGG GCACAGGCGT GGCCATCCAG
CTGGTGGCGC AGCAGGACTT CTCGAGCCTG CAGCTGGTCA CGCCCTACGA CTCGATGCTC
GAAGTGGCGA AGAAGCGCTT TCCGCTGGTT CCGCTCGCGC TCTTGCTGCG GCACCGCTTC
GACTCGCTCA CGCACTGCAA GGAAGTGGCC GCCAAGACCC AGGTGCTGCT GGCCGAGCGC
GACGACGTGG TGCTGCCCGA GCGCTCGCAG AAGCTGATCG CGGCCTGGCC CACGCCCATC
AGCGTGCAGA CCGTGCCTGC CTCGGACCAC CACAGCATCA TGGGGCTCGA GGCGACCTGG
CTTTATCTGG TCGACTTTGC GTTGACGGCT ATCCTTCCCG AGCCGATCGC GGCCTGA
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| Protein sequence | MSSSKAFRIA LSASAAAIGG MAAYWTLLAT RQGHILFNAR KLPVVHLSDD FSTYSHTVPG
GMVRGYVYHP QGEEALQDLF IYFAGRGEDV RATAQALHWL PEGFGFAAVN YRGVADSEGH
PSEIASVADA IQFANHLRKA FPQARLHVVG RSLGTGVAIQ LVAQQDFSSL QLVTPYDSML
EVAKKRFPLV PLALLLRHRF DSLTHCKEVA AKTQVLLAER DDVVLPERSQ KLIAAWPTPI
SVQTVPASDH HSIMGLEATW LYLVDFALTA ILPEPIAA
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