| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3937 |
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| Symbol | |
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| ID | 7970366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4177085 |
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| End bp | 4177840 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794523 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002945817 |
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| Protein GI | 239816907 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0563072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGCG CCAGCACCAA ATCCATCGCA TCCCCTGCCA CCGCCGCTGT GGCCGGGAAC
GGCCCAGCCG CCACCGACAA GGGCAGTTCC ATCGAAAGCA TCGCGCAGGA CATCGCCACC
GCCATCGTCG AGAAGCGCCT GCCGCCCGGC ACCTGGCTGC GCGAGGAGGC GCTGGGCCGC
GTCTATTCGG TGAGCCGCAC CAAGATCCGC GCGGCCTTGC TGATGCTCTC GAAGGACAAG
CTCATCGAGA TGATTCCCGA CAAGGGCGCG TTCGTCTGCC AGCCCACGGT GCAGGAGGCG
CGCGAGGTGT TCGCGGTGCG CCGCATCCTC GAAAGCGAGG TGGTGCGCCT GTTCATCGCC
AATGCACGGC CGCGCGACTA CCAGGTGCTG GAGCAGCACA TCAAGTTCGA GCGCACGGCG
CTGCGCCAGA CCACCACCAC GGGCACCGTG CGCGAGAAAG TGCTGGGCGA TTTCCATGTG
GCGCTGGCGG AGGCCACCGG CAACAAGACG CTGGCCGAAC TGGTGCGCGA ACTGGTCGCG
CGCAGCTCGC TGATCGCGAT GCTCTACCAC TCGTCGAACG ACCCGCATTG CTCGTCGGAC
GAGCACTCGG ACTTCCTTCG CATCTGCCGC AAGGGCGACG TGGAAGGCGC CGTGCTCTGC
ATGATCGACC ACCTGGAGCG CATCGAGACC AGCCTGGAAC TCGGCACCGA GAAGCCCGAC
CGCCAGCTCG ACCTGGTGAA GGCGCTGCTC GCCTAG
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| Protein sequence | MPRASTKSIA SPATAAVAGN GPAATDKGSS IESIAQDIAT AIVEKRLPPG TWLREEALGR
VYSVSRTKIR AALLMLSKDK LIEMIPDKGA FVCQPTVQEA REVFAVRRIL ESEVVRLFIA
NARPRDYQVL EQHIKFERTA LRQTTTTGTV REKVLGDFHV ALAEATGNKT LAELVRELVA
RSSLIAMLYH SSNDPHCSSD EHSDFLRICR KGDVEGAVLC MIDHLERIET SLELGTEKPD
RQLDLVKALL A
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