Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3936 |
Symbol | |
ID | 7970365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4176298 |
End bp | 4177035 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644794522 |
Product | Asp/Glu/hydantoin racemase |
Protein accession | YP_002945816 |
Protein GI | 239816906 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4126] Hydantoin racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.104662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCATCA AGATCATCAA TCCCAACACC ACCTGGAGCA TGACCGAGAA GATCGGCGCC TGCGCCCGCG CGGTGGCGAG CGCCGGCACG CAGATCGTCG CGGTCAGCCC GGCCATGGGG CCGGCTTCCA TCGAAAGCCA CTACGACGAG GCGCTGGCCG TGCCCGGCCT GCTGCAGGAA ATTGCGGCCG GCGAGCGCGA AGGCTTCGAG GGCTACGTGA TCGCCTGCTT CGGCGATCCG GGCCTGAGGG CCGCACGCGA ACTGGCGCGC GGTCCGGTGG TGGGCATTGC CGAAGCCGCG ATGCACCTGG CCAGCATGGT GGGCAGCCGC TTCAGCGTGG TGACCACGCT CGGCCGCACG ATGGGCCAGG CCTGGCACCT GGCCGAGGTC TACGGCATGG AGCGCTTCTG CGCCAAGGTG CGCGCCTGCG AATTGCCGGT GCTCGAGCTC GAGGAGCCCG GCTCCCAGGC ACGCGAGCGC ATCGTCGACG AATGCCGCCG CGCGCTCGAG GAAGACGGCG CCGACTGCAT CGTGCTCGGC TGCGCCGGCA TGACCGACCT GTGCGAGCAC ATCGGCGGCC TGCTCGGCGT GCCGGTGATC GACGGCGTGG CTGCGGCCAC CCGGCTGGTC GAATCGCTGG TCGCGCTGAA GCTCTCGACC AGCAAGCGCG GCGAGTTGGC CCATCCGCTG CCCAAGGCCA TGAAGGGCGC GCTCGAGGGC TTCACCTTGC GCGGCTGA
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Protein sequence | MRIKIINPNT TWSMTEKIGA CARAVASAGT QIVAVSPAMG PASIESHYDE ALAVPGLLQE IAAGEREGFE GYVIACFGDP GLRAARELAR GPVVGIAEAA MHLASMVGSR FSVVTTLGRT MGQAWHLAEV YGMERFCAKV RACELPVLEL EEPGSQARER IVDECRRALE EDGADCIVLG CAGMTDLCEH IGGLLGVPVI DGVAAATRLV ESLVALKLST SKRGELAHPL PKAMKGALEG FTLRG
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