| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3844 |
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| Symbol | |
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| ID | 7969701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4066191 |
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| End bp | 4067072 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794430 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002945724 |
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| Protein GI | 239816814 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGG CCACCATTGC AACGCCCGTC GCCATGACAC CCCCTTCCAA GCCCGCCGCA
CCGCCGCCGG TAGCGGCCGG CGCCAAGCTC AAGACCAGCG CCTTCAAGGT GCCGGGCGAG
GGCTCGAGCG TGACCATCAG CGTGGTCACG GTGGTGGCGC TGGTCGCGCT GTGGTTCCTC
GTGACCAACA TGGGCTGGGT CAAGCCGCTC TTCCTGCCCA CGCCGCAGGC GGTGTTCCAG
CAGTTCTACG AATACCTCAC GGGCCAGGCC AACGACAAGC CGCTGTGGCA GCACTTCCTT
GCGAGCATGT TCCGCGTGTT CTCGGCCTTC CTGCTGGCCT GCATCACGGC CATCCCGGTG
GGCATTGCCA TGGGCATGAG CCGCTTCTGG CGCGGCATCT TCGATCCGCC GCTGGAGTTC
TACCGGCCGC TGCCGCCGCT GGCCTACCTG CCGCTGATCA TCATCTGGTT CGGCATCGAC
GAGCTGCCCA AGGTGCTGCT GATCTTCCTG AGCTGCTTCG CGCCGCTGGC GCTGGCCGCG
CGCTCGGGCA TGCGCAGCGC GTCGCAGGAG CAGATCAATG CCGCGTATTC GATGGGTGCG
AGCTACATGC AGGTGATACG GCACGTCATA TTGCCGTCGG CGCTGCCCGA CATCCTGGTG
GGCATGCGCA TTGCCATCGG CTTCGGCTGG ACCACGCTGG TGGCGGCCGA GATGGTGGCG
GCCAACATGG GCCTGGGCCA GATGGTGCTG AACGCGTCGA ACTTCCTGCG CACCGACATC
GTCATCATGG GCATCATCGT CATCGGCGTG GTGGCCTATC TGTTCGACCT GCTGATGCGG
TGGCTCGAGC GGCGCCTGGT ACCCTGGAAA GGGCGCATGT AG
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| Protein sequence | MPEATIATPV AMTPPSKPAA PPPVAAGAKL KTSAFKVPGE GSSVTISVVT VVALVALWFL
VTNMGWVKPL FLPTPQAVFQ QFYEYLTGQA NDKPLWQHFL ASMFRVFSAF LLACITAIPV
GIAMGMSRFW RGIFDPPLEF YRPLPPLAYL PLIIIWFGID ELPKVLLIFL SCFAPLALAA
RSGMRSASQE QINAAYSMGA SYMQVIRHVI LPSALPDILV GMRIAIGFGW TTLVAAEMVA
ANMGLGQMVL NASNFLRTDI VIMGIIVIGV VAYLFDLLMR WLERRLVPWK GRM
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