Gene Vapar_3824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3824 
Symbol 
ID7969681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4042077 
End bp4043234 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content71% 
IMG OID644794410 
Productacetate kinase 
Protein accessionYP_002945704 
Protein GI239816794 
COG category[C] Energy production and conversion 
COG ID[COG0282] Acetate kinase 
TIGRFAM ID[TIGR00016] acetate kinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.56864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCTGT TCGAGGCGCC GGCCGAGGGC GGTGCGCTGC CTGCCGCCCG CTGGTCGGGC 
CAGGCCGATG GCCTGGGCGC GGGGCTGAAG GCGCGGCTGC GCGTGCGCGA TGCCGAGGGC
CGCACGCTGC ACGATGCGGC GCTGGAAGGC GACAGCCGCT CGCACCAGGG CGCGCTGGCT
GCGCTGCTCG AATGGCATGC ACAACAAGGC GACGGCGGCC GCATCGCGGC GGTCGGCCAT
CGCATCGTGC ATGGCGGCGT GAACTTCGTG GCGCCGGTGC GCATCGACGA TGCGGTGCTG
GCCGAACTGG CTGCGCTCGA GCCGCTTGCG CCGCTGCACC AGCCGCACAA CCTCGCGGGC
GTGCGCGCGG CCATGAAGGC TTTCGATGGC GTGCCGCAGG TGGCGTGCTT CGACACCGCC
TTTCATGCCA GCCAGCCCGA TGTGAACCGC CGCTTCGCGC TGCCGCGCGC GCTGCACGAT
GCAGGCGTGC GGCGCTACGG CTTCCACGGC CTGTCCTACG AATCGATCGT GACGCAGTTC
GCGCAACTGG CGCCGCAGCT GGCACGGCAG CGCGTGATCG TCGCGCACCT GGGCAACGGC
GCATCGATGT GCGGCATGGC CGAGGGCCGG TCGGTGGCCA CGACGATGAG CTTCTCGCCG
CTCGACGGCC TCACCATGGG CACGCGCTGC GGGCATCTCG ATGCGGCCGT GGTGCTGTAT
TTGATGCGCT CGCAGGGCAT GTCGGCGGAC GATGTCGAGA AGCTGCTGTT CCGCGAATCG
GGCCTGCTGG GGCTGTCGGG AATTTCCAGC GACATGCGCG AGCTGGAGGC TTCGGCCGTG
CCCGCCGCCG CCGAAGCCAT CGCGCATTTC ACCGAGCAGG TGGTGCAGCA CATGGGCAGC
CTGGCTGCGG CGCTGCGCGG CGTGGATGCC ATCGTGTTCA CCGGGGGCAT CGGCGAGAAC
GCCGCCGCGC TGCGCGAGCG CGTCCTTCTG CAATGCGGCT GGCTCGGCTT GCGCGTCGAC
GTGGAAGCGA ACCGCGCGGG CAAGGCGCAA CTCACCACGC CCGAAAGCGC CGTCAGCGCC
TGGGTGCTGC GCACCGACGA AGAGGCCGTG ATCGCGCGGC ACACCGCGCG GCTGCTGCGG
CTCAGCCAGG CTGGATAG
 
Protein sequence
MALFEAPAEG GALPAARWSG QADGLGAGLK ARLRVRDAEG RTLHDAALEG DSRSHQGALA 
ALLEWHAQQG DGGRIAAVGH RIVHGGVNFV APVRIDDAVL AELAALEPLA PLHQPHNLAG
VRAAMKAFDG VPQVACFDTA FHASQPDVNR RFALPRALHD AGVRRYGFHG LSYESIVTQF
AQLAPQLARQ RVIVAHLGNG ASMCGMAEGR SVATTMSFSP LDGLTMGTRC GHLDAAVVLY
LMRSQGMSAD DVEKLLFRES GLLGLSGISS DMRELEASAV PAAAEAIAHF TEQVVQHMGS
LAAALRGVDA IVFTGGIGEN AAALRERVLL QCGWLGLRVD VEANRAGKAQ LTTPESAVSA
WVLRTDEEAV IARHTARLLR LSQAG