Gene Vapar_3795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3795 
Symbol 
ID7970955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4012043 
End bp4013056 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content64% 
IMG OID644794381 
Productfructose-1,6-bisphosphatase 
Protein accessionYP_002945676 
Protein GI239816766 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0158] Fructose-1,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAC AAAAGATCTC CCTCACCCGC TACCTCGTCG AACAGCAGCG CGCCGACGGC 
CTCATTCCCG GCCAACTGCG CCTGTTGCTC GAAGTGGTGG CCCGCGCCTG CAAGAGCATC
AGCCAGGCCG TCAACAAGGG CGCGCTGGGG GGAGTGCTCG GCACCGCCGA GAGCGAGAAC
GTGCAGGGCG AGATCCAGAA GAAGCTGGAC ATCATCGCCA ACGAAGTGCT CATCGAAGCC
AACGAATGGG GCGGCCACCT TGCGGCCATG GCCAGCGAGG AAATGGACAG CATCTACGTG
GTGCCCAACC GCTACCCGCA GGGCGAATAC CTGCTCATGT TCGACCCGCT CGACGGCAGC
AGCAACATCG ACGTGAACGT GAGCATCGGC ACCATCTTCA GCGTGCTGAA AAAGCCCGAC
GACACCCCCG GCGTGCAGGA AGCCGACTTC CTGCAGCCCG GCACCCAGCA GGTGGCGGCC
GGCTACTGCA TCTACGGCCC GCAGACCACC CTGGTGCTCA CCGTGGGCAA CGGCGTGGCC
ATGTTCACGC TCGACCGCGA GCAAGGCAGC TTCGTGCTCA CGCAGGAAGA CATCCAGATC
CCGGCCGACA CCAAGGAATT TGCGGTCAAC ATGAGCAACA TGCGCCACTG GGACGAGCCC
ATGAAGCGCT ACATCGACGA ATGCCTGGCC GGCAAGGAAG GCCCGCGCGG CAAGGACTTC
AACATGCGCT GGATTGCCAG CATGGTGGCC GACGTGCACC GCATCCTGAT GCGCGGCGGC
GTCTTCATGT ACCCGTGGGA CAAGCGCGAG CCCGAAAAGG CCGGCAAGCT GCGCCTGATG
TACGAGGCCA ACCCCATGAG CTGGCTGGTC GAGCAGGCCG GCGGCGCCGC CACCAACGGC
AAGCAGCGCA TCCTGGAGCT GCAGCCCACC AAACTGCACG AGCGCGTGAG CGTGATGTTG
GGTTCGCGTA ACGAAGTCGA GCGTTTGACC AAGTACCACG CCGAAAAGGC CTGA
 
Protein sequence
MAQQKISLTR YLVEQQRADG LIPGQLRLLL EVVARACKSI SQAVNKGALG GVLGTAESEN 
VQGEIQKKLD IIANEVLIEA NEWGGHLAAM ASEEMDSIYV VPNRYPQGEY LLMFDPLDGS
SNIDVNVSIG TIFSVLKKPD DTPGVQEADF LQPGTQQVAA GYCIYGPQTT LVLTVGNGVA
MFTLDREQGS FVLTQEDIQI PADTKEFAVN MSNMRHWDEP MKRYIDECLA GKEGPRGKDF
NMRWIASMVA DVHRILMRGG VFMYPWDKRE PEKAGKLRLM YEANPMSWLV EQAGGAATNG
KQRILELQPT KLHERVSVML GSRNEVERLT KYHAEKA