| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3759 |
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| Symbol | |
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| ID | 7970919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3977805 |
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| End bp | 3979307 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794346 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_002945641 |
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| Protein GI | 239816731 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.041178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGGAA TCGTCGGCGT TGTCAGCAAC GCACCCGTCA ATCAGCTGCT CTATGACGCC
TTGCTGCTGC TGCAGCACCG CGGCCAGGAT GCGGCCGGCA TCGTCACCCT GCTGGAGCGC
AAGTTCTTCA TGCACAAGGC CAAGGGCATG GTGCGCGACG TGTTCCGCAC GCGCAACATG
CGCGCGCTGC CGGGCAGCGT GGGCCTGGGC CAGGTGCGCT ACCCGACCGC GGGCAACGCC
TACAGCGAGG AAGAGGCGCA GCCCTTCTAC GTGAACGCGC CCTTCGGCAT CGTGCTGGTG
CACAACGGCA ACCTGACCAA CGCGCATGCG CTGCGCTCGG AGCTGTTCTC CACCGACCAT
CGCCACACCA ACACCGAGAG CGACTCCGAA GTGCTGCTCA ACGTGCTGGC TCACGAGATC
GAGCGTTCCT CGCGCGGCGT GCCGTTGCAT CCGGCCGAGG TGTTTGCCGC TGTCAAGAAC
GTCTACAAGC GCCTGCGCGG CTCGTACGCC GTGGTCTCGC TGATCGCCGG CCACGGCCTG
CTGGCCTTCC GTGACCCCTA CGGCATCCGT CCGCTGTGCA TGGGCCGCAG TGCCGACGGC
ACCGTGATGG TGGCGAGCGA ATCGGTGGCG CTCGAAGGCT CGGGCCACGT GTTCGAGCGC
AACATCGAGC CGGGCGAAGC GGTGTTCATC GACCTCGAAG GCAACGTGCA CTCGATGCAG
TGCGCCGAAG GGGCGACGCT CAACCCGTGC ATCTTCGAAT TCGTCTACCT GGCAAGGCCC
GACTCGGTGC TCGACGGCAT TTCGGTCTAC CAGGCGCGGC TCAACCTGGG CGAAACGCTG
GCCAAGCGCG TGGTGTCCAC GGTGCCGCCG AACCAGATCG ACGTGATCAT TCCCATCCCC
GAATCGAGCC GGCCGAGCGC CACGCAGCTC GCGCACCTGC TCGGCGTGCC GTACCGCGAA
GGCTTCGTGA AGAACCGCTA CGTGGGCCGC ACCTTCATCA TGCCGGGGCA GGGCGTGCGC
AAGAAGTCGG TGCGCCAGAA GCTCAACGTG ATTGCCAGCG AGTTCAAGGG CCGCAACGTG
CTGCTGGTCG ACGACTCCAT CGTGCGCGGC ACCACCAGCC GCGAGATCGT CCAGATGGCG
CGCGACGCCG GTGCGCGAAA GGTCTACCTG GCCAGCGCGG CGCCGCCCGT GCGCTACCCC
AACGTCTACG GCATCGACAT GCCCACCAAG GACGAGCTGG TCGCGCACGA CCGCACCGTC
GAGCAGATCC GCGAGCTGAT CGGCTGCGAC GCGCTGATCT ACCAGGACGT CGACGCCATG
AAGCGCGCCA TCGGCTCGCT CAACCCCAAG CTCGACGGCT TCGATGCCTC CTGCTTCGAC
GGCGTGTACG TGACCGGCGA CATCGACACC GAAGCCATCT CGCGCATGAA CGGCAACCGT
CCGCGCGTCG AGGAGACCGA AGAAGATTCT TCGCGCCTGG CGCTTCCCAA CCACAGCGAG
TGA
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| Protein sequence | MCGIVGVVSN APVNQLLYDA LLLLQHRGQD AAGIVTLLER KFFMHKAKGM VRDVFRTRNM
RALPGSVGLG QVRYPTAGNA YSEEEAQPFY VNAPFGIVLV HNGNLTNAHA LRSELFSTDH
RHTNTESDSE VLLNVLAHEI ERSSRGVPLH PAEVFAAVKN VYKRLRGSYA VVSLIAGHGL
LAFRDPYGIR PLCMGRSADG TVMVASESVA LEGSGHVFER NIEPGEAVFI DLEGNVHSMQ
CAEGATLNPC IFEFVYLARP DSVLDGISVY QARLNLGETL AKRVVSTVPP NQIDVIIPIP
ESSRPSATQL AHLLGVPYRE GFVKNRYVGR TFIMPGQGVR KKSVRQKLNV IASEFKGRNV
LLVDDSIVRG TTSREIVQMA RDAGARKVYL ASAAPPVRYP NVYGIDMPTK DELVAHDRTV
EQIRELIGCD ALIYQDVDAM KRAIGSLNPK LDGFDASCFD GVYVTGDIDT EAISRMNGNR
PRVEETEEDS SRLALPNHSE
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