Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3747 |
Symbol | |
ID | 7970904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3966399 |
End bp | 3967391 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644794331 |
Product | Taurine catabolism dioxygenase TauD/TfdA |
Protein accession | YP_002945629 |
Protein GI | 239816719 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2175] Probable taurine catabolism dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.378977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAA CGCTCACCCG CTTCGTGCGC AGCAAGGCGC CCGCCGGCTC CGACCTGCCC GTCCTCATGA CGCCCGCGCA TGCCGGCGAA GACCTGCTCT CGGCCGTGCA GCGCCTGCGT CCGCAGATCG AGGAGGCGCT GCTGCTTGCC GGCGGCGTGC TGCTGCGCGG CTTCTCGGTG CCGGCAGTGG AGACCTTCCA GCAGTTCGCC TCGTCGTTCG GCCATCCGCT GCTGAAGTAC GAGTTCGCCT CCACGCCGCG CTCCGCGGTG TCGGCCTCCA CCGGCGCAGG TGTCTACACC TCGACCGAAT ACCCGGCGCA CCAGAGCATT CCGCTGCACA ACGAGCAGGC CTACACGCGC GAGTGGCCGA TGAAGATCTG GTTCCACTGC GTGACCGCAT CGCCCGAAGG CGGCGAGACA CCCATTGCCG ACAGCCGCGC GGTCTACCGC CGCATGCCCG GGCACATCCG CAAGCGCTTC GAGCCCGGCA TCCTGTACGT GCGCAACTTC GGCGAGATGG ACGTGCCATG GCAGAAGGTG TTCAACACCG AAAGCCGCGC CGAGGTCCAG GCCTTCTGCG AGCGCTCGGG CATTGCGTGG GAATGGAAGG ACGACGACGG CCTGCGCACC CGGCAGCTTT GCCAGGCCGT GGAGACGCAT CCCGTGACCG GCGAGCAGGT GTGGTTCAAC CAGGCCCACC TGTTCCACAT CTCCGCGCGC GAAGCCGAGG AGCGCGAAGT GCTCGAAGAA ATCTACGGCA TCGAGAACGT GCCGCGCAAC ACCTTCTTCG CCGATGGCTC GACCATCAGC GACGAAATAT TCGGCGAGGT GCGTGCCGTG CTCGATGCGG AGACGGTGGC CTTCCCGTGG GAGGAGGGCG ACGTGCTGAT GCTCGACAAC ATGCTGGTGG CGCATGCGCG CTCGCCGTTC AAGGGGCCGC GCAAGGTGAT CGTGGCCATG GCCGAGCCGC ACGGCAATCT GGGCCGCTTC TAG
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Protein sequence | MNETLTRFVR SKAPAGSDLP VLMTPAHAGE DLLSAVQRLR PQIEEALLLA GGVLLRGFSV PAVETFQQFA SSFGHPLLKY EFASTPRSAV SASTGAGVYT STEYPAHQSI PLHNEQAYTR EWPMKIWFHC VTASPEGGET PIADSRAVYR RMPGHIRKRF EPGILYVRNF GEMDVPWQKV FNTESRAEVQ AFCERSGIAW EWKDDDGLRT RQLCQAVETH PVTGEQVWFN QAHLFHISAR EAEEREVLEE IYGIENVPRN TFFADGSTIS DEIFGEVRAV LDAETVAFPW EEGDVLMLDN MLVAHARSPF KGPRKVIVAM AEPHGNLGRF
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