| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3709 |
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| Symbol | |
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| ID | 7973942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3909526 |
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| End bp | 3910077 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794293 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_002945591 |
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| Protein GI | 239816681 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACG ACGATAGCCA GCAAAACTTC ATCCTCGGAT TTCTCCTGGC ACTGATCGCG
CTGGTGATTT TCTTCGTGCT GGGCATCGTG CTCTGGCACA AGAACCATGG CGCGGCGCCG
GCTGCCATGC CTGCCGTCGC CGTGGCTGCG GCGGCCGCAG GGCCGGCCGC CCACACCACG
GTGGCGGAGG TGACCGAGAC GGTGACGGTC GTCATTCCCG ACGGGGCCAG CATCCGCGTG
GCCGACGGCG TGGTGAATTT CTACTTCGCC ACCGGCAGCG CCGACCTGGC GCCCGGCGCG
GCCGAGGCGC TTGCCGCCGT CATCAAGGGC GTGGAGAGCG GCCGCAAGGC CGTGGTCTCG
GGCTTCCATG ACACCACCGG CGACGCGGCC ATCAACGAGC AGCTCGCGAA GAAACGCGCT
GAAACAGTCC GTGACGTGCT GGTGGGCCTG GGCGTGCCGG CCGGCAAGGT CGACCTGCAG
CGGCCCGCCA TCACCGCGGG TTCGGGCAAC GACGCCCAGG CGCGGCGCGT CGAAGTCAAG
CTGGTCGACT GA
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| Protein sequence | MSDDDSQQNF ILGFLLALIA LVIFFVLGIV LWHKNHGAAP AAMPAVAVAA AAAGPAAHTT
VAEVTETVTV VIPDGASIRV ADGVVNFYFA TGSADLAPGA AEALAAVIKG VESGRKAVVS
GFHDTTGDAA INEQLAKKRA ETVRDVLVGL GVPAGKVDLQ RPAITAGSGN DAQARRVEVK
LVD
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