| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3700 |
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| Symbol | |
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| ID | 7973933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3900028 |
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| End bp | 3901680 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794284 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002945582 |
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| Protein GI | 239816672 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTCG GCGGTTTGCA GGCGGCGGGG CCCATCTGGC GCTGGGCCTC GTTCGGGATC
ACCGTCGGCG TGCTCGCGCC GGTGCTCATG CTCGCCTGGC TCGCCTTCGG CTCGGGCGTC
GCGCACTGGG GGCCGCTGTT CGCGCACGTG CTGCCGCAGG CCGCGCTGAA CACGGCCTTG
CTGCTCATGG GCGTGGGCGC GCTGGTGCTG CTGATCGGCA CCGGCTGCGC ATGGCTCGTG
ACGGCCTGCG ACTTTCCGGG GCGCGGCGTG CTGAACTGGG CGCTGCTGCT GCCGCTCGCA
ATGCCAACCT ACATCGTCGC CTTTGCCTAC CTGGACCTGC TGCATCCGAT CGGTCCGGTG
CAGGGTGCGA TCCGCTGGGC GCTGGGCTTC GACAGCCCGC GCCAGTTCCG CCTGCCTGAC
CTGCGTTCGA TGCCGGGCGC GATCTTCGTG CTCGGCTTCG TGCTCTACCC CTACGTCTAC
ATGACGGCGC GTGCCATGTT CATGACGCAG CCCGCGCACC TGATGGAAGC GGCGCGCACG
CTGGGCGAAA GCCGGCGCGG CGCCTTCTTT CGCGTGGCGC TGCCGCTGGC CCGGCCGGCG
CTCGCAGTGG GCCTGAGCCT GGCGCTGCTC GAAACGCTCA ACGACATCGG CGCCTCCGAA
TTCCTGGGCG TGAACACGCT CACGGTGGCG GTCTACACCA CCTGGATCAC GCGCTCCGAC
CTGGCCGGTG CGGCGCAGAT CGCCTGCGCC ATGCTGTTCG TGGTGGTCGC GCTGGTCTGG
CTCGAACGCA ACGGGCGCCG GCACCAGCGC TTCGGCTCGG CGCAGCGCAT GCGCGCCGTG
CAGCCGCGGC GCCTGCACGG CGGCGCCGCC TGGCTCGCCA CCGCCATGGC GTCGCTGCCG
GTGCTGATCG GCTTCGTGGC GCCCGCGCTC TACCTGGTCT GGGAAAGCGC CAAGCGGCTG
CGCCAGGGCG GCGGCGTGTC GCAAGGGCTG CTCGCCAGCC TCGGCAACAC GGTCACGCTG
GCCGCCGGCG TCACCGTGGC GGCCGTGGCC GCGGGGCTGG TGGTGGCGTG GGCCACGCGC
AGCCAGGGAT CGCGCCCGAA CCGCGCACGC TGGCAGGCGC GCGCGGCCAC GCTGGGCTAT
GCGCTGCCGG GCACGGTGCT CGCCATTGGC CTGCTCACGC CCGCGCTCGC CTTCGATGCC
GCGCTGGCCG GCATGCTCGG CCTGCAGGGC CTGCCGCTCA TGGGCGCGGG CATCGTGCTG
GTGGTGGCCT GCGCGATCCG CTTCCTCGCC ATGCCGGTCG GCGGCATCGA GGCCGGGCTC
GCCCGCATTC CGCCCGCCAT CGAGCAGGCT TCGCGGCTGC TGGGCGAAAC CAGCGGCGGC
ACGCTCCGGC GCGTGCACCT GCCGCTGCTG CAGCCCGCCA TTGCCACGGG CGCGCTGCTG
GTCTTCGTCG ATGCCATGAA GGAACTGCCG GCCACGCTGC TGCTGCGGCC GGCCAATTTC
GACACGCTGG CCACCTGGCT CTATGCCGAG GCCGCCCGAG GCACGTATGA AGAAGGCGCG
ATTGCCGCGC TCGCCATCGT GGCGGCCGGC CTGCTGCCGG TGGTGCTGCT GGCGCGCAAC
CAACTGGGCA CGCCAGCCGC AGAGACACAA TGA
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| Protein sequence | MSFGGLQAAG PIWRWASFGI TVGVLAPVLM LAWLAFGSGV AHWGPLFAHV LPQAALNTAL
LLMGVGALVL LIGTGCAWLV TACDFPGRGV LNWALLLPLA MPTYIVAFAY LDLLHPIGPV
QGAIRWALGF DSPRQFRLPD LRSMPGAIFV LGFVLYPYVY MTARAMFMTQ PAHLMEAART
LGESRRGAFF RVALPLARPA LAVGLSLALL ETLNDIGASE FLGVNTLTVA VYTTWITRSD
LAGAAQIACA MLFVVVALVW LERNGRRHQR FGSAQRMRAV QPRRLHGGAA WLATAMASLP
VLIGFVAPAL YLVWESAKRL RQGGGVSQGL LASLGNTVTL AAGVTVAAVA AGLVVAWATR
SQGSRPNRAR WQARAATLGY ALPGTVLAIG LLTPALAFDA ALAGMLGLQG LPLMGAGIVL
VVACAIRFLA MPVGGIEAGL ARIPPAIEQA SRLLGETSGG TLRRVHLPLL QPAIATGALL
VFVDAMKELP ATLLLRPANF DTLATWLYAE AARGTYEEGA IAALAIVAAG LLPVVLLARN
QLGTPAAETQ
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