| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3699 |
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| Symbol | |
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| ID | 7973932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3898920 |
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| End bp | 3899984 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794283 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002945581 |
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| Protein GI | 239816671 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC GCCCCGGCGT CCAAGGCCGC GCCGCCCGCG CACTGATCGG CGTCACCGCC
GCCTGGCTGG CTGCCGCCGC TGCCCTGCCC GCGCACGCTG CCAGCGATGA GCTCACGCTC
TACACCACGC GCGAAGCCGC GCTGATCCAG CCCCTGATCT CGGCCTTCAG CGCGCAGAGC
AAGATCAAGG TGAACACGGT GTTCGTGAAG GACGGCCTGC TCGAACGCGT CAAGGCCGAA
GGCGCGCGCT CGCCGGCCGA CGTGCTGATG ACGGTGGACA TCGGCAACCT GATGGACCTG
GTCGATGGCG GCGTGACGCA GCCGGTGAAA TCGGCCGCGC TCGAATCGGC CGTGCCCGCC
AACCTGCGCG GCGCCGACGG CCAGTGGTTC GCGCTCTCGC TGCGCGCGCG CGTGCTCTAC
GCCGACAGGG ACCAGCCGAT CACCAGCTTC CGCTACGAAG ACCTGGCCAA CCCCAAATGG
AAGGGCAAGG TCTGCATCCG CGCGGGCCAG CACCCCTACA ACACGGCGCT GATCGCGGCC
ATGATCGCGC ACGACGGCGA GGCCAAGACC GAGCAGTGGC TGCGCGGCGT CAAGGCCAAC
CTGGCCCGCA AGGCCACCGG CGGCGACCGC GACGTGGCGC GCGACATCCT GGGCGGCATC
TGCGATATCG GCCTGGCCAA CTCCTACTAC GTCGGCCAGA TGAAGAGCGC TGCGGCCGGC
ACCGACGCGC GCAAGTGGGG CGACGCCATC AAGGTGGTCC GCCCGACCTT TGCCGGCGCC
AAGGGCGGCG GCACGCACGT CAACATCAGC GGCGCGGCCG TGGCCAAGAA CGCGCCGCAG
CGCGCCAATG CGGTCAAGCT GCTCGAGTTC CTGGTGTCGG AGCCGGCGCA GGCGCTCTAC
GCACAGGCCA ACTACGAATA TCCGGTGCGC AAGGGCGTGG CGCTCGATCC GATCATCGGA
GAGACCATCG GCGAGCTGAA GGCCGACCCG CTGCCGGTGG CCGAGATTGC CAAGTACCGC
AAGCAGGCCA GCGCGCTGGT CGACAAGGTC GGTTTCGACT TGTAA
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| Protein sequence | MTDRPGVQGR AARALIGVTA AWLAAAAALP AHAASDELTL YTTREAALIQ PLISAFSAQS
KIKVNTVFVK DGLLERVKAE GARSPADVLM TVDIGNLMDL VDGGVTQPVK SAALESAVPA
NLRGADGQWF ALSLRARVLY ADRDQPITSF RYEDLANPKW KGKVCIRAGQ HPYNTALIAA
MIAHDGEAKT EQWLRGVKAN LARKATGGDR DVARDILGGI CDIGLANSYY VGQMKSAAAG
TDARKWGDAI KVVRPTFAGA KGGGTHVNIS GAAVAKNAPQ RANAVKLLEF LVSEPAQALY
AQANYEYPVR KGVALDPIIG ETIGELKADP LPVAEIAKYR KQASALVDKV GFDL
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