| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3680 |
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| Symbol | |
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| ID | 7973913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3878875 |
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| End bp | 3879333 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794264 |
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| Product | Carboxymuconolactone decarboxylase |
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| Protein accession | YP_002945562 |
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| Protein GI | 239816652 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCACC CACAAGCAAG CCACAACGGC AACGACAACA ACCTGCGCTA CGCGCGCGGA
CTCGCCAGAC TCCAGCAGAT CGACGGTGAA GGCGGCGTCA AGGTCGTCGA GAGCCTGGCC
GGCATCGCAC CCGACTTCGC ACGCCTCCTG ATCGAGTTTC CGTTCGGCGA CATCTACTCG
CGCCCCGGCC TCGACCTGCG TTCGCGCGAG ATCGCGGTGG TGGCCGCGCT CACCGCCATG
GGCAATGCCG CGCCGCAGCT CAAGGTGCAC ATCCAGGGCG CGCTCAACGT CGGCGTCACG
CGCACCGAGA TCGTCGAGAC CATCATGCAG ATGGCGGTGT ACGCGGGCTT TCCGGCCGCG
CTCAACGGCC TGGCGGCGGC GCGCGAGGTG TTTGCGGCGG ACGATGAAAA AAGCGCGCAG
TCCCTTGCGG AACCGCGCGC TCTTGTCGAA GCACCCTGA
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| Protein sequence | MTHPQASHNG NDNNLRYARG LARLQQIDGE GGVKVVESLA GIAPDFARLL IEFPFGDIYS
RPGLDLRSRE IAVVAALTAM GNAAPQLKVH IQGALNVGVT RTEIVETIMQ MAVYAGFPAA
LNGLAAAREV FAADDEKSAQ SLAEPRALVE AP
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